RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SCAIQ8N9R8 606 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 TRPC4APQ8TEL6 797 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 PPP4R1Q8TF05 950 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 GPR20Q99678 358 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 CEP41Q9BYV8 373 aa16.33■□□□□ 0.2
CHMP1A-201ENST00000397901 MYO18AQ92614 2054 aaKnown RBP16.32■□□□□ 0.2
CHMP1A-201ENST00000397901 CCDC162PA2VCL2 907 aa16.32■□□□□ 0.2
CHMP1A-201ENST00000397901 SERPINE1P05121 402 aa16.32■□□□□ 0.2
CHMP1A-201ENST00000397901 PAX3P23760 479 aa16.32■□□□□ 0.2
CHMP1A-201ENST00000397901 HSPA13P48723 471 aa16.32■□□□□ 0.2
CHMP1A-201ENST00000397901 TMED10P49755 219 aaKnown RBP16.32■□□□□ 0.2
CHMP1A-201ENST00000397901 HEATR6Q6AI08 1181 aaKnown RBP16.32■□□□□ 0.2
CHMP1A-201ENST00000397901 PAOXQ6QHF9 649 aa16.32■□□□□ 0.2
CHMP1A-201ENST00000397901 GADL1Q6ZQY3 521 aa16.32■□□□□ 0.2
CHMP1A-201ENST00000397901 LPCAT2Q7L5N7 544 aa16.32■□□□□ 0.2
CHMP1A-201ENST00000397901 TTC30AQ86WT1 665 aa16.32■□□□□ 0.2
CHMP1A-201ENST00000397901 HPS6Q86YV9 775 aa16.32■□□□□ 0.2
CHMP1A-201ENST00000397901 TMEM126BQ8IUX1 230 aa16.32■□□□□ 0.2
CHMP1A-201ENST00000397901 DEFB107AQ8IZN7 70 aa16.32■□□□□ 0.2
CHMP1A-201ENST00000397901 KHSRPQ92945 711 aaKnown RBP eCLIP16.32■□□□□ 0.2
CHMP1A-201ENST00000397901 SORT1Q99523 831 aa16.32■□□□□ 0.2
CHMP1A-201ENST00000397901 NT5C1AQ9BXI3 368 aa16.32■□□□□ 0.2
CHMP1A-201ENST00000397901 ZNF358Q9NW07 568 aa16.32■□□□□ 0.2
CHMP1A-201ENST00000397901 ITGA11Q9UKX5 1188 aa16.32■□□□□ 0.2
CHMP1A-201ENST00000397901 DPYSL4O14531 572 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 GAS2O43903 313 aaKnown RBP16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 CNMDO75829 334 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 F7P08709 466 aaPredicted RBP16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 GSTT2P0CG29 244 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 GSTT2BP0CG30 244 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 THRAP10827 490 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 ZNF12P17014 697 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 ZNF23P17027 643 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 MGAT1P26572 445 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 ATICP31939 592 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 SLC6A3Q01959 620 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 ZNF362Q5T0B9 420 aaPredicted RBP16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 THOC7Q6I9Y2 204 aaKnown RBP16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 CES3Q6UWW8 571 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 ACOT1Q86TX2 421 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 PHTF2Q8N3S3 785 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 LZTR1Q8N653 840 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 ATP2A3Q93084 1043 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 DCPSQ96C86 337 aaKnown RBP16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 PGLYRP2Q96PD5 576 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 TBCBQ99426 244 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 R3HDMLQ9H3Y0 253 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 RNPEPQ9H4A4 650 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 HEMK1Q9Y5R4 338 aaPredicted RBP16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 TRIP11Q15643 1979 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 MDM4O15151 490 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 PAPSS1O43252 624 aaPredicted RBP16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 ADAM23O75077 832 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 CNTFP26441 200 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 BCAP31P51572 246 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 SEMA5AQ13591 1074 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 TMEM132DQ14C87 1099 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 STILQ15468 1287 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 SLC10A6Q3KNW5 377 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 ELMSAN1Q6PJG2 1045 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 AMIGO2Q86SJ2 522 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 SULF1Q8IWU6 871 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 CLEC4CQ8WTT0 213 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 CASP10Q92851 521 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 QKIQ96PU8 341 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 PPP1R10Q96QC0 940 aaKnown RBP16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 LPIN3Q9BQK8 851 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 ELP3Q9H9T3 547 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 TMEM216Q9P0N5 145 aa16.31■□□□□ 0.2
CHMP1A-201ENST00000397901 MYOCOSA0A1B0GUC4 107 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 PRKCGP05129 697 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 ITGAXP20702 1163 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 NIPAL4Q0D2K0 466 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 INCA1Q0VD86 236 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 ITGA7Q13683 1181 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 CLPPQ16740 277 aaPredicted RBP16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 FRMD7Q6ZUT3 714 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 TRIML2Q8N7C3 387 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 CDKL2Q92772 493 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 ATXN7L3BQ96GX2 97 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 LGMNQ99538 433 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 GCOM2Q9BZD3 368 aaPredicted RBP16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 MAN1C1Q9NR34 630 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 CROTQ9UKG9 612 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 PACSIN3Q9UKS6 424 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 DCXO43602 365 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 GABBR2O75899 941 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 GK3PQ14409 553 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 C4orf22Q6V702 233 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 NANOGNBQ7Z5D8 188 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 FBXW8Q8N3Y1 598 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 TFB1MQ8WVM0 346 aaKnown RBP16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 COPS5Q92905 334 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 KCTD15Q96SI1 283 aaPredicted RBP16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 TUT1Q9H6E5 874 aaKnown RBP16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 LIN28AQ9H9Z2 209 aaKnown RBP16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 IFT122Q9HBG6 1241 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 DTLQ9NZJ0 730 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 HESX1Q9UBX0 185 aa16.3■□□□□ 0.2
CHMP1A-201ENST00000397901 AP4E1Q9UPM8 1137 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms