RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 TBC1D30Q9Y2I9 924 aa19.96■□□□□ 0.79
PDLIM2-205ENST00000397761 RASA4BC9J798 803 aa19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 SMAPO00193 183 aa19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 DFFAO00273 331 aa19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 RASA4O43374 803 aa19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 STK10O94804 968 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 PRAMEF12O95522 483 aa19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 POU3F3P20264 500 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 PTPN3P26045 913 aa19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 OR1E1P30953 314 aa19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 PAPOLAP51003 745 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 IFI35P80217 286 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 ADAM15Q13444 863 aa19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 ZNF77Q15935 545 aa19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 ANKRD20A2Q5SQ80 823 aa19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 ANKRD20A1Q5TYW2 823 aa19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 ANKRD20A3Q5VUR7 823 aa19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 SETD3Q86TU7 594 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 BBS7Q8IWZ6 715 aa19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 HJURPQ8NCD3 748 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 RIN3Q8TB24 985 aa19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 CCDC110Q8TBZ0 833 aa19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 CPT1BQ92523 772 aa19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 TXLNGYQ9BZA5 131 aa19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 FOXP3Q9BZS1 431 aa19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 SMG9Q9H0W8 520 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 MTRF1LQ9UGC7 380 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-205ENST00000397761 ARHGAP42A6NI28 874 aa19.94■□□□□ 0.78
PDLIM2-205ENST00000397761 LINC01565O15544 149 aa19.94■□□□□ 0.78
PDLIM2-205ENST00000397761 RAMP2O60895 175 aa19.94■□□□□ 0.78
PDLIM2-205ENST00000397761 HOXB8P17481 243 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-205ENST00000397761 CHKAP35790 457 aa19.94■□□□□ 0.78
PDLIM2-205ENST00000397761 RARS2Q5T160 578 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-205ENST00000397761 MPP7Q5T2T1 576 aa19.94■□□□□ 0.78
PDLIM2-205ENST00000397761 ARHGAP36Q6ZRI8 547 aa19.94■□□□□ 0.78
PDLIM2-205ENST00000397761 PPIL6Q8IXY8 311 aa19.94■□□□□ 0.78
PDLIM2-205ENST00000397761 ZNF567Q8N184 647 aa19.94■□□□□ 0.78
PDLIM2-205ENST00000397761 NAT8LQ8N9F0 302 aa19.94■□□□□ 0.78
PDLIM2-205ENST00000397761 DEPDC1BQ8WUY9 529 aa19.94■□□□□ 0.78
PDLIM2-205ENST00000397761 PRCCQ92733 491 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-205ENST00000397761 HMCESQ96FZ2 354 aa19.94■□□□□ 0.78
PDLIM2-205ENST00000397761 IL12RB2Q99665 862 aa19.94■□□□□ 0.78
PDLIM2-205ENST00000397761 MAGEH1Q9H213 219 aa19.94■□□□□ 0.78
PDLIM2-205ENST00000397761 MIA3Q5JRA6 1907 aa19.94■□□□□ 0.78
PDLIM2-205ENST00000397761 ILVBLA1L0T0 632 aa19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 KCNK1O00180 336 aa19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 TRDMT1O14717 391 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 MATN3O15232 486 aa19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 CBLBQ13191 982 aa19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 SERINC3Q13530 473 aa19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 KCNJ11Q14654 390 aa19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 COL19A1Q14993 1142 aa19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 POLD3Q15054 466 aaPredicted RBP19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 CTC1Q2NKJ3 1217 aa19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 TIGD7Q6NT04 549 aaPredicted RBP19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 ZNF783Q6ZMS7 281 aa19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 ING5Q8WYH8 240 aa19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 MAML1Q92585 1016 aa19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 FUT8Q9BYC5 575 aa19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 TSPYL1Q9H0U9 437 aa19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 TTYH1Q9H313 450 aaPredicted RBP19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 KIF9Q9HAQ2 790 aa19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 IPO11Q9UI26 975 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 TRHDEQ9UKU6 1024 aa19.93■□□□□ 0.78
PDLIM2-205ENST00000397761 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 CHADO15335 359 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 PPFIA2O75334 1257 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 METTL18O95568 372 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 PEX11BO96011 259 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 HSPA9P38646 679 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 GNA12Q03113 381 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 TNK2Q07912 1038 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 ZBTB17Q13105 803 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 TEX44Q53QW1 395 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 C6orf118Q5T5N4 469 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 CXorf57Q6NSI4 855 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 ARHGEF18Q6ZSZ5 1173 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 TMC3Q7Z5M5 1100 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 ARID3BQ8IVW6 561 aaPredicted RBP19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 NPAS3Q8IXF0 933 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 ZCCHC9Q8N567 271 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 ARHGEF2Q92974 986 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 TMA16Q96EY4 203 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 IGSF9Q9P2J2 1179 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 SCAMP3O14828 347 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 TSPAN3O60637 253 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 CCNB1P14635 433 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 FSHRP23945 695 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 FDFT1P37268 417 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 ZNF177Q13360 481 aaPredicted RBP19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 SEMA5AQ13591 1074 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 CBX2Q14781 532 aaPredicted RBP19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 TDRD5Q8NAT2 981 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 OR52K2Q8NGK3 314 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 TEKT5Q96M29 485 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 PHACTR1Q9C0D0 580 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 ETNK1Q9HBU6 452 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 RAB6BQ9NRW1 208 aa19.92■□□□□ 0.78
PDLIM2-205ENST00000397761 CLEC1BQ9P126 229 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms