RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 DPYSL2Q16555 572 aa15.31■□□□□ 0.04
CAPN3-207ENST00000397200 OTOP3Q7RTS5 596 aa15.31■□□□□ 0.04
CAPN3-207ENST00000397200 MAP7D3Q8IWC1 876 aa15.31■□□□□ 0.04
CAPN3-207ENST00000397200 WBP2Q969T9 261 aa15.31■□□□□ 0.04
CAPN3-207ENST00000397200 AZIN2Q96A70 460 aa15.31■□□□□ 0.04
CAPN3-207ENST00000397200 RTP4Q96DX8 246 aa15.31■□□□□ 0.04
CAPN3-207ENST00000397200 TTC25Q96NG3 672 aa15.31■□□□□ 0.04
CAPN3-207ENST00000397200 RBM15Q96T37 977 aaKnown RBP eCLIP15.31■□□□□ 0.04
CAPN3-207ENST00000397200 CALN1Q9BXU9 219 aa15.31■□□□□ 0.04
CAPN3-207ENST00000397200 SIK2Q9H0K1 926 aa15.31■□□□□ 0.04
CAPN3-207ENST00000397200 SAE1Q9UBE0 346 aaPredicted RBP15.31■□□□□ 0.04
CAPN3-207ENST00000397200 XPO7Q9UIA9 1087 aaKnown RBP15.31■□□□□ 0.04
CAPN3-207ENST00000397200 AGO1Q9UL18 857 aaKnown RBP15.31■□□□□ 0.04
CAPN3-207ENST00000397200 ZNF510Q9Y2H8 683 aa15.31■□□□□ 0.04
CAPN3-207ENST00000397200 E2F8A0AVK6 867 aa15.3■□□□□ 0.04
CAPN3-207ENST00000397200 ACSL4O60488 711 aa15.3■□□□□ 0.04
CAPN3-207ENST00000397200 LATS1O95835 1130 aa15.3■□□□□ 0.04
CAPN3-207ENST00000397200 KLKB1P03952 638 aa15.3■□□□□ 0.04
CAPN3-207ENST00000397200 LAMP2P13473 410 aa15.3■□□□□ 0.04
CAPN3-207ENST00000397200 RPL22P35268 128 aaKnown RBP15.3■□□□□ 0.04
CAPN3-207ENST00000397200 USP4Q13107 963 aa15.3■□□□□ 0.04
CAPN3-207ENST00000397200 STAT4Q14765 748 aa15.3■□□□□ 0.04
CAPN3-207ENST00000397200 ZNF77Q15935 545 aa15.3■□□□□ 0.04
CAPN3-207ENST00000397200 KYNUQ16719 465 aa15.3■□□□□ 0.04
CAPN3-207ENST00000397200 CA9Q16790 459 aa15.3■□□□□ 0.04
CAPN3-207ENST00000397200 LEXMQ3ZCV2 418 aa15.3■□□□□ 0.04
CAPN3-207ENST00000397200 PPP6R3Q5H9R7 873 aaPredicted RBP15.3■□□□□ 0.04
CAPN3-207ENST00000397200 ACBD5Q5T8D3 534 aaPredicted RBP15.3■□□□□ 0.04
CAPN3-207ENST00000397200 TTC19Q6DKK2 380 aaPredicted RBP15.3■□□□□ 0.04
CAPN3-207ENST00000397200 FOXR1Q6PIV2 292 aa15.3■□□□□ 0.04
CAPN3-207ENST00000397200 HTR3DQ70Z44 454 aa15.3■□□□□ 0.04
CAPN3-207ENST00000397200 PYROXD2Q8N2H3 581 aa15.3■□□□□ 0.04
CAPN3-207ENST00000397200 PQLC3Q8N755 202 aa15.3■□□□□ 0.04
CAPN3-207ENST00000397200 NAT8LQ8N9F0 302 aa15.3■□□□□ 0.04
CAPN3-207ENST00000397200 BCAS4Q8TDM0 211 aa15.3■□□□□ 0.04
CAPN3-207ENST00000397200 OSBPL2Q9H1P3 480 aa15.3■□□□□ 0.04
CAPN3-207ENST00000397200 TRPV4Q9HBA0 871 aa15.3■□□□□ 0.04
CAPN3-207ENST00000397200 E7ESA3 106 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 ALOX15BO15296 676 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 GREM1O60565 184 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 RBP3P10745 1247 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 L1CAMP32004 1257 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 VIPR2P41587 438 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 IFI35P80217 286 aaPredicted RBP15.29■□□□□ 0.04
CAPN3-207ENST00000397200 ANKRD20A8PQ5CZ79 823 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 MS4A13Q5J8X5 152 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 PIK3R6Q5UE93 754 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 Q6ZNB5 142 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 CHSY1Q86X52 802 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 PPIL6Q8IXY8 311 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 RIBC1Q8N443 379 aaPredicted RBP15.29■□□□□ 0.04
CAPN3-207ENST00000397200 PLD5Q8N7P1 536 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 UHMK1Q8TAS1 419 aaKnown RBP15.29■□□□□ 0.04
CAPN3-207ENST00000397200 CPT1BQ92523 772 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 C1orf74Q96LT6 269 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 KCTD15Q96SI1 283 aaPredicted RBP15.29■□□□□ 0.04
CAPN3-207ENST00000397200 DDX50Q9BQ39 737 aaKnown RBP15.29■□□□□ 0.04
CAPN3-207ENST00000397200 MAGEB5Q9BZ81 275 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 ZFP14Q9HCL3 533 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 OBP2AQ9NY56 170 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 OR12D3Q9UGF7 316 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 HS3ST4Q9Y661 456 aa15.29■□□□□ 0.04
CAPN3-207ENST00000397200 TLDC2A0PJX2 215 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 SCAMP3O14828 347 aaKnown RBP15.28■□□□□ 0.04
CAPN3-207ENST00000397200 CREB3O43889 395 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 SP100P23497 879 aaPredicted RBP15.28■□□□□ 0.04
CAPN3-207ENST00000397200 ATP5DP30049 168 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 STIP1P31948 543 aaKnown RBP15.28■□□□□ 0.04
CAPN3-207ENST00000397200 MLLT6P55198 1093 aaPredicted RBP15.28■□□□□ 0.04
CAPN3-207ENST00000397200 LONRF1Q17RB8 773 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 RAP1GAP2Q684P5 730 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 NADSYN1Q6IA69 706 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 PCDH19Q8TAB3 1148 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 RSAD2Q8WXG1 361 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 E2F7Q96AV8 911 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 EPAS1Q99814 870 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 MAK16Q9BXY0 300 aaKnown RBP15.28■□□□□ 0.04
CAPN3-207ENST00000397200 DNAJC17Q9NVM6 304 aaKnown RBP15.28■□□□□ 0.04
CAPN3-207ENST00000397200 FAM50BQ9Y247 325 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 SNX10Q9Y5X0 201 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 EYSQ5T1H1 3165 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 GOLGA6L7A0A1B0GV03 622 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 CFAP69A5D8W1 941 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 HEPACAM2A8MVW5 462 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 APOL1O14791 398 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 TACR2P21452 398 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 FCARP24071 287 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 ARL4AP40617 200 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 ZNF135P52742 658 aaPredicted RBP15.28■□□□□ 0.04
CAPN3-207ENST00000397200 NRG1Q02297 640 aaPredicted RBP15.28■□□□□ 0.04
CAPN3-207ENST00000397200 RASA2Q15283 850 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 SMAD2Q15796 467 aaKnown RBP15.28■□□□□ 0.04
CAPN3-207ENST00000397200 PUS10Q3MIT2 529 aaKnown RBP15.28■□□□□ 0.04
CAPN3-207ENST00000397200 ADGRF1Q5T601 910 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 PTCRAQ6ISU1 281 aaPredicted RBP15.28■□□□□ 0.04
CAPN3-207ENST00000397200 NPNTQ6UXI9 565 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 CENPUQ71F23 418 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 TAOK1Q7L7X3 1001 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 TDRPQ86YL5 185 aa15.28■□□□□ 0.04
CAPN3-207ENST00000397200 BBS7Q8IWZ6 715 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms