RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 CROCC2H7BZ55 1655 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 CDH17Q12864 832 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 CELF3Q5SZQ8 465 aaKnown RBP17.72■□□□□ 0.43
MCF2L-208ENST00000397030 LRIG3Q6UXM1 1119 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 SUGP1Q8IWZ8 645 aaKnown RBP17.72■□□□□ 0.43
MCF2L-208ENST00000397030 SEMA4BQ9NPR2 832 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-208ENST00000397030 FAM153AQ9UHL3 310 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 NCAM2O15394 837 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 ATG7O95352 703 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 GJB6O95452 261 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 TFPIP10646 304 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 RAPSNQ13702 412 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 C1DQ13901 141 aaKnown RBP17.72■□□□□ 0.43
MCF2L-208ENST00000397030 GPSM1Q86YR5 675 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 ZC3H7AQ8IWR0 971 aaKnown RBP17.72■□□□□ 0.43
MCF2L-208ENST00000397030 C19orf18Q8NEA5 215 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 POPDC2Q9HBU9 364 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 KIF1CO43896 1103 aaKnown RBP17.72■□□□□ 0.43
MCF2L-208ENST00000397030 USP12O75317 370 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 GUCY1B2O75343 617 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 PTPN1P18031 435 aaKnown RBP17.72■□□□□ 0.43
MCF2L-208ENST00000397030 BGNP21810 368 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 TALDO1P37837 337 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 PTSQ03393 145 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 RPTNQ6XPR3 784 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 CNOT3O75175 753 aaKnown RBP17.72■□□□□ 0.43
MCF2L-208ENST00000397030 CFIP05156 583 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 MTA1Q13330 715 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 NAA30Q147X3 362 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-208ENST00000397030 NR1I3Q14994 352 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 LRRC6Q86X45 466 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 CDH9Q9ULB4 789 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 FAM86B2P0C5J1 330 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 CPA3P15088 417 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 CCNIQ14094 377 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 TRPM4Q8TD43 1214 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 PAFAH2Q99487 392 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 PPCSQ9HAB8 311 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 NRCAMQ92823 1304 aa17.72■□□□□ 0.43
MCF2L-208ENST00000397030 ITPKBP27987 946 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 ZNF720Q7Z2F6 126 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 OR56A4Q8NGH8 313 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 SH3GL1Q99961 368 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 MLPHQ9BV36 600 aaPredicted RBP17.71■□□□□ 0.43
MCF2L-208ENST00000397030 FRMD8P1Q9BZ68 369 aaPredicted RBP17.71■□□□□ 0.43
MCF2L-208ENST00000397030 ZNF518BQ9C0D4 1074 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 ATP13A3Q9H7F0 1226 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 MRGBPQ9NV56 204 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 NEXMIFQ5QGS0 1516 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 SAC3D1A6NKF1 404 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 ZSWIM7Q19AV6 140 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 MAP3K14Q99558 947 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 MPOP05164 745 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 POLD2P49005 469 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 SRLQ86TD4 932 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 KIFC1Q9BW19 673 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 CDHR5Q9HBB8 845 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 HEY2Q9UBP5 337 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 RNASEH2AO75792 299 aaKnown RBP17.71■□□□□ 0.43
MCF2L-208ENST00000397030 AQP5P55064 265 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 FOXM1Q08050 763 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 MAD2L1Q13257 205 aaPredicted RBP17.71■□□□□ 0.43
MCF2L-208ENST00000397030 TBC1D25Q3MII6 688 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 KIAA0319LQ8IZA0 1049 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 FTHL17Q9BXU8 183 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 VPS45Q9NRW7 570 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 PHTF1Q9UMS5 762 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 ST3GAL5Q9UNP4 418 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 THRAP10827 490 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 CXCR2P25025 360 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 GALNT3Q14435 633 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 ADGRA1Q86SQ6 560 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 CCNJLQ8IV13 435 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 TMEM132CQ8N3T6 1108 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 OR14C36Q8NHC7 312 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 ADAM30Q9UKF2 790 aa17.71■□□□□ 0.43
MCF2L-208ENST00000397030 CLTCL1P53675 1640 aa17.71■□□□□ 0.42
MCF2L-208ENST00000397030 A0A1W2PQJ5 194 aa17.7■□□□□ 0.42
MCF2L-208ENST00000397030 UBDO15205 165 aa17.7■□□□□ 0.42
MCF2L-208ENST00000397030 ARHGEF19Q8IW93 802 aa17.7■□□□□ 0.42
MCF2L-208ENST00000397030 ZFPM1Q8IX07 1006 aa17.7■□□□□ 0.42
MCF2L-208ENST00000397030 RIBC1Q8N443 379 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-208ENST00000397030 CCDC185Q8N715 623 aa17.7■□□□□ 0.42
MCF2L-208ENST00000397030 HTR3CQ8WXA8 447 aa17.7■□□□□ 0.42
MCF2L-208ENST00000397030 SEC16BQ96JE7 1060 aa17.7■□□□□ 0.42
MCF2L-208ENST00000397030 FAM126AQ9BYI3 521 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-208ENST00000397030 EFCAB1Q9HAE3 211 aa17.7■□□□□ 0.42
MCF2L-208ENST00000397030 PCDH12Q9NPG4 1184 aa17.7■□□□□ 0.42
MCF2L-208ENST00000397030 ARHGAP28Q9P2N2 729 aa17.7■□□□□ 0.42
MCF2L-208ENST00000397030 ZNF232Q9UNY5 417 aa17.7■□□□□ 0.42
MCF2L-208ENST00000397030 SYN1P17600 705 aa17.7■□□□□ 0.42
MCF2L-208ENST00000397030 ATP13A4Q4VNC1 1196 aa17.7■□□□□ 0.42
MCF2L-208ENST00000397030 DAB2IPQ5VWQ8 1189 aa17.7■□□□□ 0.42
MCF2L-208ENST00000397030 TTC23Q5W5X9 447 aa17.7■□□□□ 0.42
MCF2L-208ENST00000397030 BNC2Q6ZN30 1099 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-208ENST00000397030 GPR135Q8IZ08 494 aa17.7■□□□□ 0.42
MCF2L-208ENST00000397030 ST13P5Q8NFI4 369 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-208ENST00000397030 ZNF563Q8TA94 476 aa17.7■□□□□ 0.42
MCF2L-208ENST00000397030 SMG7Q92540 1137 aaKnown RBP17.7■□□□□ 0.42
MCF2L-208ENST00000397030 LENG9Q96B70 501 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms