RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 MAPK15Q8TD08 544 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 FRS2Q8WU20 508 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 IRGQQ8WZA9 623 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 SEMA4DQ92854 862 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 RPL10LQ96L21 214 aaKnown RBP8.71□□□□□ -1.02
SCFD1-202ENST00000396629 FCRL2Q96LA5 508 aaPredicted RBP8.71□□□□□ -1.02
SCFD1-202ENST00000396629 ABCG4Q9H172 646 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 OSBPL2Q9H1P3 480 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 TMEM8AQ9HCN3 771 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 PREBQ9HCU5 417 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 STARD5Q9NSY2 213 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 SARDHQ9UL12 918 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 MTMR6Q9Y217 621 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 TRAF3IP3Q9Y228 551 aa8.71□□□□□ -1.02
SCFD1-202ENST00000396629 K7ESM1 405 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 SCAMP1O15126 338 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 CALUO43852 315 aaPredicted RBP8.7□□□□□ -1.02
SCFD1-202ENST00000396629 GABBR2O75899 941 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 PDIA4P13667 645 aaKnown RBP8.7□□□□□ -1.02
SCFD1-202ENST00000396629 TGM2P21980 687 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 GTF2H1P32780 548 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 NNMTP40261 264 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 STK19P49842 368 aaPredicted RBP8.7□□□□□ -1.02
SCFD1-202ENST00000396629 TAS2R38P59533 333 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 CNTN1Q12860 1018 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 POM121L1PQ3SYA9 428 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 DCAF6Q58WW2 860 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 FAM46CQ5VWP2 391 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 ZNF574Q6ZN55 896 aaPredicted RBP8.7□□□□□ -1.02
SCFD1-202ENST00000396629 DSG4Q86SJ6 1040 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 SIX6OS1Q8N1H7 587 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 CFAP52Q8N1V2 620 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 ATXN7L3BQ96GX2 97 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 SLC39A13Q96H72 371 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 DUSP23Q9BVJ7 150 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 NUCKS1Q9H1E3 243 aaKnown RBP8.7□□□□□ -1.02
SCFD1-202ENST00000396629 CAAP1Q9H8G2 361 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 HESX1Q9UBX0 185 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 NEMP2A6NFY4 417 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 RIOK3O14730 519 aaKnown RBP8.7□□□□□ -1.02
SCFD1-202ENST00000396629 SUV39H1O43463 412 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 SETSIPP0DME0 302 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 KRT13P13646 458 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 ITGB6P18564 788 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 PLK1P53350 603 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 SLC12A1Q13621 1099 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 KRT39Q6A163 491 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 NEK5Q6P3R8 708 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 ATG14Q6ZNE5 492 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 GRAMD1CQ8IYS0 662 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 OR13H1Q8NG92 308 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 UBA3Q8TBC4 463 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 OR8D1Q8WZ84 308 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 CCNL2Q96S94 520 aaPredicted RBP8.7□□□□□ -1.02
SCFD1-202ENST00000396629 EXOC1Q9NV70 894 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 ATXN7L1Q9ULK2 861 aaPredicted RBP8.7□□□□□ -1.02
SCFD1-202ENST00000396629 PPM1HQ9ULR3 514 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 CEP83Q9Y592 693 aa8.7□□□□□ -1.02
SCFD1-202ENST00000396629 RP1P56715 2156 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 SCN8AQ9UQD0 1980 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 ALOX15BO15296 676 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 YEATS4O95619 227 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 LTFP02788 710 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 LCP1P13796 627 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 SULT2A1Q06520 285 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 NNTQ13423 1086 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 ZNF284Q2VY69 593 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 ZSCAN23Q3MJ62 389 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 ABI3BPQ7Z7G0 1075 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 DCP2Q8IU60 420 aaKnown RBP8.69□□□□□ -1.02
SCFD1-202ENST00000396629 FAM186BQ8IYM0 893 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 ARL14Q8N4G2 192 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 TPCN2Q8NHX9 752 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 WDR36Q8NI36 951 aaKnown RBP8.69□□□□□ -1.02
SCFD1-202ENST00000396629 FAM174AQ8TBP5 190 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 SEMA3CQ99985 751 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 MMRN2Q9H8L6 949 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 GPR27Q9NS67 375 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 RAB20Q9NX57 234 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 ANKMY1Q9P2S6 941 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 TLR6Q9Y2C9 796 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 CSNK1G3Q9Y6M4 447 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 DOPEY2Q9Y3R5 2298 aa8.69□□□□□ -1.02
SCFD1-202ENST00000396629 PMS2P1A4D2B8 440 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 C1QTNF3-AMACRE9PGA6 284 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 O00370 1275 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 MCF2LO15068 1137 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 SLC31A1O15431 190 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 ATP9BO43861 1147 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 TCEA3O75764 348 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 AFPP02771 609 aaKnown RBP8.68□□□□□ -1.02
SCFD1-202ENST00000396629 FYNP06241 537 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 VDRP11473 427 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 PRLRP16471 622 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 NR2F2P24468 414 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 AKT2P31751 481 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 PSMC2P35998 433 aaKnown RBP8.68□□□□□ -1.02
SCFD1-202ENST00000396629 HNRNPKP61978 463 aaKnown RBP eCLIP8.68□□□□□ -1.02
SCFD1-202ENST00000396629 C6orf132Q5T0Z8 1188 aa8.68□□□□□ -1.02
SCFD1-202ENST00000396629 PIP5KL1Q5T9C9 394 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms