RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 POPDC2Q9HBU9 364 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 SLCO1B3Q9NPD5 702 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 CHST7Q9NS84 486 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 NDUFA13Q9P0J0 144 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 PADI3Q9ULW8 664 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 PIN4Q9Y237 131 aaKnown RBP5.5□□□□□ -1.53
VPS41-203ENST00000395969 R3HDM2Q9Y2K5 976 aaKnown RBP5.5□□□□□ -1.53
VPS41-203ENST00000395969 TEX264Q9Y6I9 313 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 PSMD3O43242 534 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 AP1G1O43747 822 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 RNASEH1O60930 286 aaKnown RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 DNAJC6O75061 913 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 VAMP1P23763 118 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 CNTFP26441 200 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 TKTP29401 623 aaKnown RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 CHKAP35790 457 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 EMP3P54852 163 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 PPIDQ08752 370 aaKnown RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 CBX3Q13185 183 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 PRAMEF19Q5SWL8 479 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 CAPN12Q6ZSI9 719 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 UBE2Q1Q7Z7E8 422 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 ZNF554Q86TJ5 538 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 FAM35AQ86V20 835 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 SRRM1Q8IYB3 904 aaKnown RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 ST13P4Q8IZP2 240 aaPredicted RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 LZTR1Q8N653 840 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 PTCD2Q8WV60 388 aaKnown RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 RXFP2Q8WXD0 754 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 HAUS1Q96CS2 278 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 CATSPER2Q96P56 530 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 SMOQ99835 787 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 NAT9Q9BTE0 207 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 CCSER2Q9H7U1 834 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 ATP13A1Q9HD20 1204 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 CUEDC1Q9NWM3 386 aaPredicted RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 ANGPTL2Q9UKU9 493 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 WASF2Q9Y6W5 498 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 DRGXA6NNA5 263 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 PPEF2O14830 753 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 KLF11O14901 512 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 LSM1O15116 133 aaKnown RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 FGF10O15520 208 aaPredicted RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 ATMINO43313 823 aaPredicted RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 BUD23O43709 281 aaKnown RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 CD97P48960 835 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 PKN2Q16513 984 aaKnown RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 GNASQ5JWF2 1037 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 ADGRD1Q6QNK2 874 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 ZNF783Q6ZMS7 281 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 OTOAQ7RTW8 1153 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 MTDHQ86UE4 582 aaKnown RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 TRABD2AQ86V40 505 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 TEX26Q8N6G2 289 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 DIS3LQ8TF46 1054 aaKnown RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 ALKBH8Q96BT7 664 aaKnown RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 SENP8Q96LD8 212 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 HEXIM2Q96MH2 286 aaKnown RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 RANBP9Q96S59 729 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 HERC2P3Q9BVR0 1158 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 SNX25Q9H3E2 840 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 NRDE2Q9H7Z3 1164 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 UBAP1Q9NZ09 502 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 NINJ2Q9NZG7 142 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 TRHDEQ9UKU6 1024 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 CCDC160A6NGH7 325 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 CYB561D2O14569 222 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 MAGEC1O60732 1142 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 OPHN1O60890 802 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 BAIAP3O94812 1187 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 KRT1P04264 644 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 DHRS4L1P0CG22 281 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 ANPEPP15144 967 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 CYP2B6P20813 491 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 RAP1GAPP47736 663 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 KPNA1P52294 538 aaPredicted RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 CDH8P55286 799 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 RPL26P61254 145 aaKnown RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 YWHAZP63104 245 aaKnown RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 CREMQ03060 361 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 CDC16Q13042 620 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 CALCOCO2Q13137 446 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 SPARCL1Q14515 664 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 KRT72Q14CN4 511 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 TOMM20Q15388 145 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 SEZ6Q53EL9 994 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 NCBP2-AS2Q69YL0 99 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 SLC8B1Q6J4K2 584 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 IZUMO2Q6UXV1 221 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 ADGRG6Q86SQ4 1221 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 CCDC25Q86WR0 208 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.49□□□□□ -1.53
VPS41-203ENST00000395969 PCDH19Q8TAB3 1148 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 DTX3LQ8TDB6 740 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 CPT1BQ92523 772 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 STMN2Q93045 179 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 SKA1Q96BD8 255 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 DGCR14Q96DF8 476 aaKnown RBP5.49□□□□□ -1.53
VPS41-203ENST00000395969 NSL1Q96IY1 281 aa5.49□□□□□ -1.53
VPS41-203ENST00000395969 MPP4Q96JB8 637 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms