RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 IRAK2O43187 625 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 HTR7P34969 479 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 SLCO1A2P46721 670 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 SEMA5AQ13591 1074 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 PDK1Q15118 436 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 TEAD2Q15562 447 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 CCDC38Q502W7 563 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 HECTD3Q5T447 861 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 FAM72AQ5TYM5 149 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 SNX30Q5VWJ9 437 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 FAM72DQ6L9T8 149 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 GET4Q7L5D6 327 aaPredicted RBP15.51■□□□□ 0.07
SCAF11-204ENST00000395454 EXOC3L1Q86VI1 746 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 FAM72BQ86X60 149 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 CCDC13Q8IYE1 715 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 MAB21L3Q8N8X9 362 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 MAFAQ8NHW3 353 aaPredicted RBP15.51■□□□□ 0.07
SCAF11-204ENST00000395454 ITFG1Q8TB96 612 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 ADAM32Q8TC27 787 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 HTR3CQ8WXA8 447 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 MAML1Q92585 1016 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 RIPOR3Q96MK2 946 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 OSBPL2Q9H1P3 480 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.51■□□□□ 0.07
SCAF11-204ENST00000395454 SLC24A2Q9UI40 661 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 TEX264Q9Y6I9 313 aa15.51■□□□□ 0.07
SCAF11-204ENST00000395454 A0A0A0MRY4 1105 aa15.5■□□□□ 0.07
SCAF11-204ENST00000395454 MOSPD3O75425 235 aa15.5■□□□□ 0.07
SCAF11-204ENST00000395454 TBX18O95935 607 aa15.5■□□□□ 0.07
SCAF11-204ENST00000395454 VAV1P15498 845 aa15.5■□□□□ 0.07
SCAF11-204ENST00000395454 FSHRP23945 695 aa15.5■□□□□ 0.07
SCAF11-204ENST00000395454 ZSCAN26Q16670 478 aa15.5■□□□□ 0.07
SCAF11-204ENST00000395454 ARHGAP15Q53QZ3 475 aa15.5■□□□□ 0.07
SCAF11-204ENST00000395454 BRMS1LQ5PSV4 323 aa15.5■□□□□ 0.07
SCAF11-204ENST00000395454 C10orf120Q5SQS8 335 aa15.5■□□□□ 0.07
SCAF11-204ENST00000395454 GPR158Q5T848 1215 aa15.5■□□□□ 0.07
SCAF11-204ENST00000395454 HEATR6Q6AI08 1181 aaKnown RBP15.5■□□□□ 0.07
SCAF11-204ENST00000395454 MSANTD2Q6P1R3 559 aa15.5■□□□□ 0.07
SCAF11-204ENST00000395454 SPATA13Q96N96 652 aa15.5■□□□□ 0.07
SCAF11-204ENST00000395454 DHRS4Q9BTZ2 278 aa15.5■□□□□ 0.07
SCAF11-204ENST00000395454 EPN3Q9H201 632 aa15.5■□□□□ 0.07
SCAF11-204ENST00000395454 ACSS3Q9H6R3 686 aa15.5■□□□□ 0.07
SCAF11-204ENST00000395454 WDCPQ9H6R7 721 aa15.5■□□□□ 0.07
SCAF11-204ENST00000395454 NEU3Q9UQ49 428 aa15.5■□□□□ 0.07
SCAF11-204ENST00000395454 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.5■□□□□ 0.07
SCAF11-204ENST00000395454 SMIM23A6NLE4 172 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 GOLGA8MH3BSY2 632 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 NCAM2O15394 837 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 OPHN1O60890 802 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 SPAG6O75602 509 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 MAP3K6O95382 1288 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 CEBPBP17676 345 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 HOXC13P31276 330 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 MTHFRP42898 656 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 TUBP50607 506 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 CDK16Q00536 496 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 NR1H3Q13133 447 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 CBX2Q14781 532 aaPredicted RBP15.49■□□□□ 0.07
SCAF11-204ENST00000395454 ARTNQ5T4W7 220 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 B4GALNT4Q76KP1 1039 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 TADA2BQ86TJ2 420 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 CCDC110Q8TBZ0 833 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 PYROXD1Q8WU10 500 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 LRRC39Q96DD0 335 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 CYP2S1Q96SQ9 504 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 EPAS1Q99814 870 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 BRD8Q9H0E9 1235 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 CCDC134Q9H6E4 229 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 EIF2B3Q9NR50 452 aaKnown RBP15.49■□□□□ 0.07
SCAF11-204ENST00000395454 SFMBT1Q9UHJ3 866 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 RABGEF1Q9UJ41 708 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 USP15Q9Y4E8 981 aaPredicted RBP15.49■□□□□ 0.07
SCAF11-204ENST00000395454 SYNJ2BP-COX16A0A087WUM0 186 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 EXOC1LA0A1B0GW35 172 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 PPP1R12AO14974 1030 aaPredicted RBP15.49■□□□□ 0.07
SCAF11-204ENST00000395454 COCHO43405 550 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 OAS1P00973 400 aaKnown RBP15.49■□□□□ 0.07
SCAF11-204ENST00000395454 CKMP06732 381 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 ERCC2P18074 760 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 HDCP19113 662 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 PHBP35232 272 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 ATP5C1P36542 298 aaKnown RBP15.49■□□□□ 0.07
SCAF11-204ENST00000395454 TPI1P60174 286 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 NRG1Q02297 640 aaPredicted RBP15.49■□□□□ 0.07
SCAF11-204ENST00000395454 EFEMP1Q12805 493 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 PPP2R5DQ14738 602 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 MANEALQ5VSG8 457 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 MIB1Q86YT6 1006 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 ARL14EPQ8N8R7 260 aaPredicted RBP15.49■□□□□ 0.07
SCAF11-204ENST00000395454 FBXO36Q8NEA4 188 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 ARHGEF2Q92974 986 aaKnown RBP15.49■□□□□ 0.07
SCAF11-204ENST00000395454 SLC22A12Q96S37 553 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 HAPLN3Q96S86 360 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 CDK5RAP1Q96SZ6 601 aaKnown RBP15.49■□□□□ 0.07
SCAF11-204ENST00000395454 RNF38Q9H0F5 515 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 TKTL2Q9H0I9 626 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 POMKQ9H5K3 350 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 ETNK1Q9HBU6 452 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 COX16Q9P0S2 106 aa15.49■□□□□ 0.07
SCAF11-204ENST00000395454 CTNNAL1Q9UBT7 734 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms