RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 SCAMP3O14828 347 aaKnown RBP8.65□□□□□ -1.02
GAPVD1-204ENST00000394083 LILRB3O75022 631 aa8.65□□□□□ -1.02
GAPVD1-204ENST00000394083 NFKB1P19838 968 aa8.65□□□□□ -1.02
GAPVD1-204ENST00000394083 CDKN1CP49918 316 aaPredicted RBP8.65□□□□□ -1.02
GAPVD1-204ENST00000394083 DEFB103AP81534 67 aa8.65□□□□□ -1.02
GAPVD1-204ENST00000394083 VARS2Q5ST30 1063 aaKnown RBP8.65□□□□□ -1.02
GAPVD1-204ENST00000394083 ZDHHC17Q8IUH5 632 aa8.65□□□□□ -1.02
GAPVD1-204ENST00000394083 NUDT8Q8WV74 236 aa8.65□□□□□ -1.02
GAPVD1-204ENST00000394083 TRIB3Q96RU7 358 aa8.65□□□□□ -1.02
GAPVD1-204ENST00000394083 CNGB3Q9NQW8 809 aa8.65□□□□□ -1.02
GAPVD1-204ENST00000394083 MTO1Q9Y2Z2 717 aaKnown RBP8.65□□□□□ -1.02
GAPVD1-204ENST00000394083 L3MBTL1Q9Y468 752 aa8.65□□□□□ -1.02
GAPVD1-204ENST00000394083 TMEM189-UBE2V1I3L0A0 370 aa8.65□□□□□ -1.03
GAPVD1-204ENST00000394083 CREB3O43889 395 aa8.65□□□□□ -1.03
GAPVD1-204ENST00000394083 APOEP02649 317 aa8.65□□□□□ -1.03
GAPVD1-204ENST00000394083 AHSGP02765 367 aa8.65□□□□□ -1.03
GAPVD1-204ENST00000394083 YARSP54577 528 aaKnown RBP8.65□□□□□ -1.03
GAPVD1-204ENST00000394083 SV2CQ496J9 727 aa8.65□□□□□ -1.03
GAPVD1-204ENST00000394083 HSP90B2PQ58FF3 399 aa8.65□□□□□ -1.03
GAPVD1-204ENST00000394083 NUGGCQ68CJ6 796 aa8.65□□□□□ -1.03
GAPVD1-204ENST00000394083 DSTYKQ6XUX3 929 aa8.65□□□□□ -1.03
GAPVD1-204ENST00000394083 ZSWIM9Q86XI8 627 aa8.65□□□□□ -1.03
GAPVD1-204ENST00000394083 KBTBD2Q8IY47 623 aa8.65□□□□□ -1.03
GAPVD1-204ENST00000394083 SRPK1Q96SB4 655 aaKnown RBP8.65□□□□□ -1.03
GAPVD1-204ENST00000394083 SLC30A3Q99726 388 aa8.65□□□□□ -1.03
GAPVD1-204ENST00000394083 ATXN3LQ9H3M9 355 aa8.65□□□□□ -1.03
GAPVD1-204ENST00000394083 VPS45Q9NRW7 570 aa8.65□□□□□ -1.03
GAPVD1-204ENST00000394083 IGSF9Q9P2J2 1179 aa8.65□□□□□ -1.03
GAPVD1-204ENST00000394083 A0A087WUV0 522 aaPredicted RBP8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 OR51F1A6NGY5 319 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 PRPSAP2O60256 369 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 GAS8O95995 478 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 DNAJB2P25686 324 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 ZFP36L2P47974 494 aaKnown RBP8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 STAT4Q14765 748 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 SLC39A12Q504Y0 691 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 FSTL4Q6MZW2 842 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 TLDC1Q6P9B6 456 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 LRRC8BQ6P9F7 803 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 CHFRQ96EP1 664 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 ALG14Q96F25 216 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 TLE6Q9H808 572 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 CHST12Q9NRB3 414 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 GMIPQ9P107 970 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 CDH9Q9ULB4 789 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 CXCL10P02778 98 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 MROH9Q5TGP6 573 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 GSTA5Q7RTV2 222 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 CLNKQ7Z7G1 428 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 TEKT5Q96M29 485 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 AGAP3Q96P47 875 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 NMUR2Q9GZQ4 415 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 DDIT4Q9NX09 232 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 ZNF225Q9UK10 706 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 INPP5FQ9Y2H2 1132 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 SVEP1Q4LDE5 3571 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 MTMR11A4FU01 709 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 C2orf78A6NCI8 922 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 TRIM43BA6NCK2 446 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 MAXP61244 160 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 RBM20Q5T481 1227 aaKnown RBP8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 STXBP5Q5T5C0 1151 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 PACS1Q6VY07 963 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 ZNF365Q70YC5 407 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 TRPM8Q7Z2W7 1104 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 LSRQ86X29 649 aaPredicted RBP8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 TRIM43Q96BQ3 446 aaPredicted RBP8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 LMLNQ96KR4 655 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 KLHL5Q96PQ7 755 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 UNKQ9C0B0 810 aaKnown RBP8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 ZFYVE28Q9HCC9 887 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 SSU72Q9NP77 194 aaKnown RBP8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 MKS1Q9NXB0 559 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 ARMCX1Q9P291 453 aa8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 GMPR2Q9P2T1 348 aaKnown RBP8.64□□□□□ -1.03
GAPVD1-204ENST00000394083 MPP1Q00013 466 aa8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 SP3Q02447 781 aa8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 TNK2Q07912 1038 aa8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 RINLQ6ZS11 566 aa8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 KDM4CQ9H3R0 1056 aa8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 OR51B4Q9Y5P0 310 aa8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 VPS13CQ709C8 3753 aa8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 TPP1O14773 563 aa8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 PROCP04070 461 aa8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 STIP1P31948 543 aaKnown RBP8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 BST1Q10588 318 aa8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 CALCOCO2Q13137 446 aa8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 CXorf57Q6NSI4 855 aaKnown RBP8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 ESRP1Q6NXG1 681 aaKnown RBP8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 CYS1Q717R9 158 aa8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 LDB1Q86U70 411 aaPredicted RBP8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 TEX26Q8N6G2 289 aa8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 AUTS2Q8WXX7 1259 aa8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 PSMC3IPQ9P2W1 217 aaPredicted RBP8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 SLC24A2Q9UI40 661 aa8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 NUMA1Q14980 2115 aa8.63□□□□□ -1.03
GAPVD1-204ENST00000394083 DMXL2Q8TDJ6 3036 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms