RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 CNTD1Q8N815 330 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 KREMEN2Q8NCW0 462 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 SLC22A17Q8WUG5 538 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 TEKT5Q96M29 485 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 TSGA13Q96PP4 275 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 CCDC77Q9BR77 488 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 KLF16Q9BXK1 252 aaPredicted RBP20.12■□□□□ 0.81
RAB5C-202ENST00000393860 MAD1L1Q9Y6D9 718 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 C2orf71A6NGG8 1288 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 RASA4BC9J798 803 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 NRG2O14511 850 aaPredicted RBP20.12■□□□□ 0.81
RAB5C-202ENST00000393860 RASA4O43374 803 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 IVLP07476 585 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 GJA1P17302 382 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 GABRR2P28476 465 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 KDM7AQ6ZMT4 941 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 ARL14EPQ8N8R7 260 aaPredicted RBP20.12■□□□□ 0.81
RAB5C-202ENST00000393860 SPPL3Q8TCT6 385 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 MICAL1Q8TDZ2 1067 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 PLD4Q96BZ4 506 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 MLPHQ9BV36 600 aaPredicted RBP20.12■□□□□ 0.81
RAB5C-202ENST00000393860 EMILIN2Q9BXX0 1053 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 FRMD8Q9BZ67 464 aaPredicted RBP20.12■□□□□ 0.81
RAB5C-202ENST00000393860 ZNF212Q9UDV6 495 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 IPO11Q9UI26 975 aaKnown RBP20.12■□□□□ 0.81
RAB5C-202ENST00000393860 RABGEF1Q9UJ41 708 aa20.12■□□□□ 0.81
RAB5C-202ENST00000393860 CCL16O15467 120 aa20.11■□□□□ 0.81
RAB5C-202ENST00000393860 TSPAN3O60637 253 aa20.11■□□□□ 0.81
RAB5C-202ENST00000393860 CPP00450 1065 aa20.11■□□□□ 0.81
RAB5C-202ENST00000393860 PHBP35232 272 aa20.11■□□□□ 0.81
RAB5C-202ENST00000393860 IRS1P35568 1242 aa20.11■□□□□ 0.81
RAB5C-202ENST00000393860 MAGEA3P43357 314 aa20.11■□□□□ 0.81
RAB5C-202ENST00000393860 SLC11A2P49281 568 aa20.11■□□□□ 0.81
RAB5C-202ENST00000393860 SGSHP51688 502 aa20.11■□□□□ 0.81
RAB5C-202ENST00000393860 SESN2P58004 480 aaPredicted RBP20.11■□□□□ 0.81
RAB5C-202ENST00000393860 TMED2Q15363 201 aa20.11■□□□□ 0.81
RAB5C-202ENST00000393860 CROCCP2Q86T23 111 aa20.11■□□□□ 0.81
RAB5C-202ENST00000393860 UMODL1-AS1Q8N2C9 162 aa20.11■□□□□ 0.81
RAB5C-202ENST00000393860 EIF2B3Q9NR50 452 aaKnown RBP20.11■□□□□ 0.81
RAB5C-202ENST00000393860 TRHDEQ9UKU6 1024 aa20.11■□□□□ 0.81
RAB5C-202ENST00000393860 ZFP37Q9Y6Q3 630 aaPredicted RBP20.11■□□□□ 0.81
RAB5C-202ENST00000393860 J3KR12 359 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 MATN3O15232 486 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 GLUD1P00367 558 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 AGTP01019 485 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 ITPRIPL1Q6GPH6 555 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 LEKR1Q6ZMV7 388 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 SIGLEC10Q96LC7 697 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 PRICKLE1Q96MT3 831 aaPredicted RBP20.1■□□□□ 0.81
RAB5C-202ENST00000393860 XPO6Q96QU8 1125 aaKnown RBP20.1■□□□□ 0.81
RAB5C-202ENST00000393860 APOL2Q9BQE5 337 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 MTIF3Q9H2K0 278 aaKnown RBP20.1■□□□□ 0.81
RAB5C-202ENST00000393860 XAB2Q9HCS7 855 aaKnown RBP20.1■□□□□ 0.81
RAB5C-202ENST00000393860 TLR9Q9NR96 1032 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 ZC3H7BQ9UGR2 993 aaKnown RBP20.1■□□□□ 0.81
RAB5C-202ENST00000393860 MAFFQ9ULX9 164 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 GRM6O15303 877 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 TCEA3O75764 348 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 ZNF189O75820 626 aaPredicted RBP20.1■□□□□ 0.81
RAB5C-202ENST00000393860 HLA-DQB2P05538 268 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 MGAT1P26572 445 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 OR1E1P30953 314 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 NDST2P52849 883 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 RPS24P62847 133 aaKnown RBP20.1■□□□□ 0.81
RAB5C-202ENST00000393860 SARNPP82979 210 aaKnown RBP20.1■□□□□ 0.81
RAB5C-202ENST00000393860 GAREM2Q75VX8 874 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 TMC8Q8IU68 726 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 MRPL43Q8N983 215 aaKnown RBP20.1■□□□□ 0.81
RAB5C-202ENST00000393860 OR52K1Q8NGK4 314 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 SPATA22Q8NHS9 363 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 ZFRQ96KR1 1074 aaKnown RBP20.1■□□□□ 0.81
RAB5C-202ENST00000393860 VAT1Q99536 393 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 PLAC1Q9HBJ0 212 aa20.1■□□□□ 0.81
RAB5C-202ENST00000393860 AGO1Q9UL18 857 aaKnown RBP20.1■□□□□ 0.81
RAB5C-202ENST00000393860 GBF1Q92538 1859 aa20.09■□□□□ 0.81
RAB5C-202ENST00000393860 MYL4P12829 197 aa20.09■□□□□ 0.81
RAB5C-202ENST00000393860 ACVRL1P37023 503 aa20.09■□□□□ 0.81
RAB5C-202ENST00000393860 PPP3CCP48454 512 aa20.09■□□□□ 0.81
RAB5C-202ENST00000393860 PPP2R2AP63151 447 aa20.09■□□□□ 0.81
RAB5C-202ENST00000393860 SMAD3P84022 425 aaKnown RBP20.09■□□□□ 0.81
RAB5C-202ENST00000393860 ZNF33AQ06730 810 aa20.09■□□□□ 0.81
RAB5C-202ENST00000393860 STXBP5Q5T5C0 1151 aa20.09■□□□□ 0.81
RAB5C-202ENST00000393860 LRRC8BQ6P9F7 803 aa20.09■□□□□ 0.81
RAB5C-202ENST00000393860 CCDC149Q6ZUS6 474 aa20.09■□□□□ 0.81
RAB5C-202ENST00000393860 OXNAD1Q96HP4 312 aaPredicted RBP20.09■□□□□ 0.81
RAB5C-202ENST00000393860 IL12RB2Q99665 862 aa20.09■□□□□ 0.81
RAB5C-202ENST00000393860 SELENOSQ9BQE4 189 aa20.09■□□□□ 0.81
RAB5C-202ENST00000393860 CORO1BQ9BR76 489 aa20.09■□□□□ 0.81
RAB5C-202ENST00000393860 HTATIP2Q9BUP3 242 aa20.09■□□□□ 0.81
RAB5C-202ENST00000393860 RBM22Q9NW64 420 aaKnown RBP eCLIP20.09■□□□□ 0.81
RAB5C-202ENST00000393860 HCFC1R1Q9NWW0 138 aa20.09■□□□□ 0.81
RAB5C-202ENST00000393860 LZTS1Q9Y250 596 aa20.09■□□□□ 0.81
RAB5C-202ENST00000393860 TCRBV9S1A1TA0A576 114 aa20.08■□□□□ 0.81
RAB5C-202ENST00000393860 RAMP2O60895 175 aa20.08■□□□□ 0.81
RAB5C-202ENST00000393860 AP2A1O95782 977 aa20.08■□□□□ 0.81
RAB5C-202ENST00000393860 ZXDBP98169 803 aa20.08■□□□□ 0.81
RAB5C-202ENST00000393860 CDK16Q00536 496 aa20.08■□□□□ 0.81
RAB5C-202ENST00000393860 POLD3Q15054 466 aaPredicted RBP20.08■□□□□ 0.81
RAB5C-202ENST00000393860 TNFAIP8L3Q5GJ75 292 aa20.08■□□□□ 0.81
RAB5C-202ENST00000393860 TIGD7Q6NT04 549 aaPredicted RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms