RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 SYCE2Q6PIF2 218 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 FRMD7Q6ZUT3 714 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 EFL1Q7Z2Z2 1120 aaKnown RBP7.77□□□□□ -1.17
VTI1A-201ENST00000393077 STK32CQ86UX6 486 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 FBXO36Q8NEA4 188 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 SNX19Q92543 992 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 ELMO1Q92556 727 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 RMDN3Q96TC7 470 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 IDI2Q9BXS1 227 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 MROQ9BYG7 248 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 ANO3Q9BYT9 981 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 ELOVL6Q9H5J4 265 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 RPF2Q9H7B2 306 aaKnown RBP7.77□□□□□ -1.17
VTI1A-201ENST00000393077 WDR41Q9HAD4 459 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 FAM217BQ9NTX9 383 aaPredicted RBP7.77□□□□□ -1.17
VTI1A-201ENST00000393077 FAM8A1Q9UBU6 413 aa7.77□□□□□ -1.17
VTI1A-201ENST00000393077 TCRBV5S4A2TA0A5A2 114 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 A8MV72 311 aaPredicted RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 KPNA7A9QM74 516 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 ANGPT2O15123 496 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 NCAM2O15394 837 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 PKLRP30613 574 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 CENPAP49450 140 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 UBXN2AP68543 259 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 POU6F2P78424 691 aaPredicted RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 PEX6Q13608 980 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 MAPRE2Q15555 327 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 CDONQ4KMG0 1287 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 TBC1D10BQ4KMP7 808 aaPredicted RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 IDO2Q6ZQW0 420 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 SLFN11Q7Z7L1 901 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 OSTM1Q86WC4 334 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 RAB43Q86YS6 212 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 RHOT1Q8IXI2 618 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 SYTL5Q8TDW5 730 aaPredicted RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 RAD54LQ92698 747 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 NXNL1Q96CM4 212 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 MAP6Q96JE9 813 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 GLT1D1Q96MS3 346 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 PKP2Q99959 881 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 KCTD14Q9BQ13 255 aaPredicted RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 MECRQ9BV79 373 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 CPNE5Q9HCH3 593 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 PLA2G4CQ9UP65 541 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 GNB5O14775 395 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 ASS1P00966 412 aaKnown RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 NR3C1P04150 777 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 CD58P19256 250 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 OPRL1P41146 370 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 OR3A3P47888 321 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 ETV1P50549 477 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 CYP4A11Q02928 519 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 NAB1Q13506 487 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 DGCR6Q14129 220 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 KIZQ2M2Z5 673 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 GPATCH4Q5T3I0 446 aaKnown RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 MROH9Q5TGP6 573 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 DENND5AQ6IQ26 1287 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 IRF2BP2Q7Z5L9 587 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 FBXO11Q86XK2 927 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 TTYH2Q9BSA4 534 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 DNAJC28Q9NX36 388 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 RGS17Q9UGC6 210 aaPredicted RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 AP4E1Q9UPM8 1137 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 BAIAP2Q9UQB8 552 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 TESMINQ9Y4I5 508 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 KCNE2Q9Y6J6 123 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 MYH1P12882 1939 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 MYH15Q9Y2K3 1946 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 H0Y858 1186 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 MEN1O00255 615 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 TOP3BO95985 862 aaKnown RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 DLDP09622 509 aaKnown RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 CETPP11597 493 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 MYCLP12524 364 aaPredicted RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 UQCRC1P31930 480 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 SOX11P35716 441 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 RPL10AP62906 217 aaKnown RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 ABATP80404 500 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 FAAP100Q0VG06 881 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 PLCL1Q15111 1095 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 SHROOM1Q2M3G4 852 aaPredicted RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 PLA2G4EQ3MJ16 856 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 ASPRV1Q53RT3 343 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 NAALADL2Q58DX5 795 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 C16orf46Q6P387 395 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 ANGPTL6Q8NI99 470 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 FAR1Q8WVX9 515 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 ALPK1Q96QP1 1244 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 TM9SF2Q99805 663 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 TDRD1Q9BXT4 1180 aaKnown RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 SAV1Q9H4B6 383 aaPredicted RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 ZNF408Q9H9D4 720 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 C17orf75Q9HAS0 396 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 MRC1P22897 1456 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 HEATR9A2RTY3 570 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 PRR23AA6NEV1 266 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 MSI1O43347 362 aaKnown RBP7.76□□□□□ -1.17
VTI1A-201ENST00000393077 CCNE2O96020 404 aa7.76□□□□□ -1.17
VTI1A-201ENST00000393077 CFL1P23528 166 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms