RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 KRT75O95678 551 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 ZNF554Q86TJ5 538 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 EDEM1Q92611 657 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 MTG1Q9BT17 334 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 PNPLA3Q9NST1 481 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 EGFL7Q9UHF1 273 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 ZNF180Q9UJW8 692 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 NDUFAF1Q9Y375 327 aa13.38□□□□□ -0.27
TRAPPC9-201ENST00000389328 KLHL33A6NCF5 533 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 VNN1O95497 513 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 LDLRP01130 860 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 ACAT1P24752 427 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 RAP1GDS1P52306 607 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 KLF1Q13351 362 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 PERM1Q5SV97 790 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 GK5Q6ZS86 529 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 IGDCC3Q8IVU1 814 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 ZNF513Q8N8E2 541 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 KCTD14Q9BQ13 255 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 CDHR5Q9HBB8 845 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 CD274Q9NZQ7 290 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 ARHGAP28Q9P2N2 729 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 XPR1Q9UBH6 696 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 FETUBQ9UGM5 382 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 AAR2Q9Y312 384 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 ERI2A8K979 691 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 CFAP99D6REC4 459 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 NDUFS3O75489 264 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 RBP1P09455 135 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 MAP3K7CLP57077 242 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 NAA20P61599 178 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 SLC2A14Q8TDB8 520 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 SKA1Q96BD8 255 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 OSBPL11Q9BXB4 747 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 DHX33Q9H6R0 707 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 CLK4Q9HAZ1 481 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 MAGEB16A2A368 324 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 CCR3P51677 355 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 NAB1Q13506 487 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 CHST13Q8NET6 341 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 BLOC1S5Q8TDH9 187 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 FAM193BQ96PV7 902 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 ZNF670Q9BS34 389 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 ASPSCR1Q9BZE9 553 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 NDFIP2Q9NV92 336 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 AFF4Q9UHB7 1163 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 C5P01031 1676 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 FAM95CA0A1B0GW59 222 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 RNASEH1O60930 286 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 RHOBTB1O94844 696 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 CD4P01730 458 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 RXRBP28702 533 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 GRIA1P42261 906 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 TAF6P49848 677 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 PLEKHG4Q58EX7 1191 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 NBPF12Q5TAG4 269 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 FBXO16Q8IX29 292 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 ZCCHC7Q8N3Z6 543 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 AZIN2Q96A70 460 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 C9orf16Q9BUW7 83 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 TMEM134Q9H6X4 195 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 FZD1Q9UP38 647 aa13.37□□□□□ -0.27
TRAPPC9-201ENST00000389328 CRTAMO95727 393 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 SLC7A2P52569 658 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 CTBP1Q13363 440 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 TAF2Q6P1X5 1199 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 SDCBP2Q9H190 292 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 SPAG4Q9NPE6 437 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 CRYBG1Q9Y4K1 1723 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 HACD1B0YJ81 288 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 FKBP9O95302 570 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 HMBSP08397 361 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 SNRPB2P08579 225 aaKnown RBP13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 S100A5P33763 92 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 DALRD3Q5D0E6 543 aaKnown RBP13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 METTL7BQ6UX53 244 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 FKBP9P1Q75LS8 142 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 PSTKQ8IV42 348 aaKnown RBP13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 MPP5Q8N3R9 675 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 P2RY11Q96G91 374 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 ACO2Q99798 780 aaKnown RBP13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 MID1IP1Q9NPA3 183 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 XPNPEP1Q9NQW7 623 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 RAB26Q9ULW5 256 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 A0A1B0GVG6 124 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 TRAFD1O14545 582 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 AMHP03971 560 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 F7P08709 466 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 TKTL1P51854 596 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 NR1D2Q14995 579 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 ARL13AQ5H913 290 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 LIPMQ5VYY2 423 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 CDHR3Q6ZTQ4 885 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 HEATR4Q86WZ0 1026 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 CCDC103Q8IW40 242 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 KBTBD2Q8IY47 623 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 EIF2AQ9BY44 585 aaKnown RBP13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 TIMMDC1Q9NPL8 285 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 SNTG2Q9NY99 539 aa13.36□□□□□ -0.27
TRAPPC9-201ENST00000389328 STK39Q9UEW8 545 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms