RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 LRRC40Q9H9A6 602 aa11.18□□□□□ -0.62
DNMT3A-203ENST00000380746 AGO3Q9H9G7 860 aaKnown RBP11.18□□□□□ -0.62
DNMT3A-203ENST00000380746 ANLNQ9NQW6 1124 aa11.18□□□□□ -0.62
DNMT3A-203ENST00000380746 TRMT13Q9NUP7 481 aaKnown RBP11.18□□□□□ -0.62
DNMT3A-203ENST00000380746 ADA2Q9NZK5 511 aa11.18□□□□□ -0.62
DNMT3A-203ENST00000380746 KANSL3Q9P2N6 904 aa11.18□□□□□ -0.62
DNMT3A-203ENST00000380746 DOCK3Q8IZD9 2030 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 XPO1O14980 1071 aaKnown RBP11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 GPC4O75487 556 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 ITGB1P05556 798 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 GP5P40197 560 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 GPR15P49685 360 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 SERPINB9P50453 376 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 PLIN5Q00G26 463 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 PRKD1Q15139 912 aaPredicted RBP11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 KIAA0319Q5VV43 1072 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 TMEM198Q66K66 360 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 SLC9A4Q6AI14 798 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 ZNF470Q6ECI4 717 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 CAPRIN2Q6IMN6 1127 aaKnown RBP11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 MAMDC4Q6UXC1 1216 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 TAC4Q86UU9 113 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 ARL10Q8N8L6 244 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 ATAD1Q8NBU5 361 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 QKIQ96PU8 341 aaKnown RBP eCLIP11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 PHACTR1Q9C0D0 580 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 NMRK2Q9NPI5 230 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 EURLQ9NYK6 297 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 MCM8Q9UJA3 840 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 MKI67P46013 3256 aaKnown RBP11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 PTGESO14684 152 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 PEX11AO75192 247 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 SMIM24O75264 130 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 ALDOAP04075 364 aaKnown RBP11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 PRKCGP05129 697 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 C2P06681 752 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 IRF1P10914 325 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 PGAM1P18669 254 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 MPSTP25325 297 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 PTPN3P26045 913 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 SPDYAQ5MJ70 313 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 SPOUT1Q5T280 376 aaKnown RBP11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 SPRYD7Q5W111 196 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 PDPK2PQ6A1A2 396 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 FSTL4Q6MZW2 842 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 GALNT4Q8N4A0 578 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 ZNF781Q8N8C0 355 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 SMG8Q8ND04 991 aaKnown RBP11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 PIP4K2CQ8TBX8 421 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 ZCWPW1Q9H0M4 648 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 TMEM30AQ9NV96 361 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 PPME1Q9Y570 386 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 NCF1BA6NI72 391 aaPredicted RBP11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 NCF1CA8MVU1 366 aaPredicted RBP11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 GLRA3O75311 464 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 DLDP09622 509 aaKnown RBP11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 NCF1P14598 390 aaPredicted RBP11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 PCSK1P29120 753 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 NR2C2P49116 596 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 NSUN2Q08J23 767 aaKnown RBP eCLIP11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 TRIP10Q15642 601 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 FAM187BQ17R55 369 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 SWT1Q5T5J6 900 aaKnown RBP11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 RIPOR1Q6ZS17 1223 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 CFAP52Q8N1V2 620 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 FAM156AQ8NDB6 213 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 CXorf38Q8TB03 319 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 PIWIL2Q8TC59 973 aaKnown RBP11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 GIPC2Q8TF65 315 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 SLC2A6Q9UGQ3 507 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 PADI3Q9ULW8 664 aa11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 HBS1LQ9Y450 684 aaKnown RBP11.17□□□□□ -0.62
DNMT3A-203ENST00000380746 E7ESA3 106 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 SP100P23497 879 aaPredicted RBP11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 PRAMEP78395 509 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 ENPEPQ07075 957 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 ART3Q13508 389 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 PARP6Q2NL67 630 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 AP1ARQ63HQ0 302 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 ESRP1Q6NXG1 681 aaKnown RBP11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 MYLK4Q86YV6 388 aaPredicted RBP11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 RELL1Q8IUW5 271 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 PSTKQ8IV42 348 aaKnown RBP11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 THEM5Q8N1Q8 247 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 ZSCAN18Q8TBC5 510 aaPredicted RBP11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 TEKT4Q8WW24 435 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 MS4A4AQ96JQ5 239 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 PPCSQ9HAB8 311 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 SP110Q9HB58 689 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 THAP1Q9NVV9 213 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 NDE1Q9NXR1 346 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 SMIM35A0A1B0GVV1 85 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 TMEM233B4DJY2 109 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 TADA2AO75478 443 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 PTPN7P35236 360 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 PTPRCAPQ14761 206 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 GRM3Q14832 879 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 C10orf120Q5SQS8 335 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 ARHGAP17Q68EM7 881 aa11.16□□□□□ -0.62
DNMT3A-203ENST00000380746 GDF6Q6KF10 455 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms