RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 SORCS1Q8WY21 1168 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 ARHGEF2Q92974 986 aaKnown RBP12.98□□□□□ -0.33
SMN1-202ENST00000380707 CELF6Q96J87 481 aaKnown RBP12.98□□□□□ -0.33
SMN1-202ENST00000380707 HERPUD2Q9BSE4 406 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 MAK16Q9BXY0 300 aaKnown RBP12.98□□□□□ -0.33
SMN1-202ENST00000380707 LRRC19Q9H756 370 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 RBM12Q9NTZ6 932 aaKnown RBP12.98□□□□□ -0.33
SMN1-202ENST00000380707 HCN2Q9UL51 889 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 MRPS17Q9Y2R5 130 aaKnown RBP12.98□□□□□ -0.33
SMN1-202ENST00000380707 hCG_1818297A0A087WSY0 165 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 TMEM221A6NGB7 291 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 M0R296 226 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 CHRNB1P11230 501 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 GLDCP23378 1020 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 ACVRL1P37023 503 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 CTSOP43234 321 aaPredicted RBP12.98□□□□□ -0.33
SMN1-202ENST00000380707 SEC13P55735 322 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 OXCT1P55809 520 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 COPS2P61201 443 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 GNG11P61952 73 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 EMC10Q5UCC4 262 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 KAZNQ674X7 775 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 MBLAC2Q68D91 279 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 NCBP2-AS2Q69YL0 99 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 SLC9A4Q6AI14 798 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 RFX6Q8HWS3 928 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 ARHGAP12Q8IWW6 846 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 PLD5Q8N7P1 536 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 FLCNQ8NFG4 579 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 TTC17Q96AE7 1141 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 HMCESQ96FZ2 354 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 WDR24Q96S15 920 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 NELL2Q99435 816 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 PSMB7Q99436 277 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 SPON2Q9BUD6 331 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 HEMGNQ9BXL5 484 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 CIPCQ9C0C6 399 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 SLC39A8Q9C0K1 460 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 MAGEH1Q9H213 219 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 MFSD1Q9H3U5 465 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 EPHX3Q9H6B9 360 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 ZDHHC4Q9NPG8 344 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 ELOVL2Q9NXB9 296 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 DONSONQ9NYP3 566 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 VPS28Q9UK41 221 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 STARD13Q9Y3M8 1113 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 RASA4BC9J798 803 aa12.97□□□□□ -0.33
SMN1-202ENST00000380707 KCNK3O14649 394 aa12.97□□□□□ -0.33
SMN1-202ENST00000380707 RASA4O43374 803 aa12.97□□□□□ -0.33
SMN1-202ENST00000380707 TIMM44O43615 452 aa12.97□□□□□ -0.33
SMN1-202ENST00000380707 ATP1A1P05023 1023 aaKnown RBP12.97□□□□□ -0.33
SMN1-202ENST00000380707 CHRM1P11229 460 aaPredicted RBP12.97□□□□□ -0.33
SMN1-202ENST00000380707 POLR2EP19388 210 aaKnown RBP12.97□□□□□ -0.33
SMN1-202ENST00000380707 KIR2DL1P43626 348 aaPredicted RBP12.97□□□□□ -0.33
SMN1-202ENST00000380707 NDST2P52849 883 aa12.97□□□□□ -0.33
SMN1-202ENST00000380707 DYNLT1P63172 113 aa12.97□□□□□ -0.33
SMN1-202ENST00000380707 GBE1Q04446 702 aa12.97□□□□□ -0.33
SMN1-202ENST00000380707 SLC10A2Q12908 348 aaPredicted RBP12.97□□□□□ -0.33
SMN1-202ENST00000380707 DMC1Q14565 340 aa12.97□□□□□ -0.33
SMN1-202ENST00000380707 PAFAH1B3Q15102 231 aaKnown RBP12.97□□□□□ -0.33
SMN1-202ENST00000380707 PPP2R5EQ16537 467 aa12.97□□□□□ -0.33
SMN1-202ENST00000380707 PARP15Q460N3 678 aa12.97□□□□□ -0.33
SMN1-202ENST00000380707 NUDT18Q6ZVK8 323 aa12.97□□□□□ -0.33
SMN1-202ENST00000380707 CCDC33Q8N5R6 958 aa12.97□□□□□ -0.33
SMN1-202ENST00000380707 LZTR1Q8N653 840 aa12.97□□□□□ -0.33
SMN1-202ENST00000380707 PJA1Q8NG27 643 aa12.97□□□□□ -0.33
SMN1-202ENST00000380707 WFIKKN2Q8TEU8 576 aa12.97□□□□□ -0.33
SMN1-202ENST00000380707 CYB5D2Q8WUJ1 264 aa12.97□□□□□ -0.33
SMN1-202ENST00000380707 ACE2Q9BYF1 805 aaPredicted RBP12.97□□□□□ -0.33
SMN1-202ENST00000380707 OSBPL8Q9BZF1 889 aa12.97□□□□□ -0.33
SMN1-202ENST00000380707 LMAN1LQ9HAT1 526 aa12.97□□□□□ -0.33
SMN1-202ENST00000380707 ATP13A1Q9HD20 1204 aa12.97□□□□□ -0.33
SMN1-202ENST00000380707 NUP205Q92621 2012 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 DFFAO00273 331 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 APOL1O14791 398 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 FANCGO15287 622 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 PI15O43692 258 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 MFSD11O43934 449 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 SNAP91O60641 907 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 CST8O60676 142 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 RNF40O75150 1001 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 MAP3K6O95382 1288 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 MSNP26038 577 aaKnown RBP12.96□□□□□ -0.33
SMN1-202ENST00000380707 CXCR5P32302 372 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 PTPN7P35236 360 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 SERPINB6P35237 376 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 PAPOLAP51003 745 aaKnown RBP12.96□□□□□ -0.33
SMN1-202ENST00000380707 YBEYP58557 167 aaPredicted RBP12.96□□□□□ -0.33
SMN1-202ENST00000380707 ECT2LQ008S8 904 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 SERINC3Q13530 473 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 EIF4HQ15056 248 aaKnown RBP12.96□□□□□ -0.33
SMN1-202ENST00000380707 PTPRNQ16849 979 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 C2orf27AQ580R0 203 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 EGFLAMQ63HQ2 1017 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 CWF19L1Q69YN2 538 aaKnown RBP12.96□□□□□ -0.33
SMN1-202ENST00000380707 IL31Q6EBC2 164 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 NPNTQ6UXI9 565 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 ARHGAP36Q6ZRI8 547 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 CCDC105Q8IYK2 499 aa12.96□□□□□ -0.33
SMN1-202ENST00000380707 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms