RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 MAPKAPK2P49137 400 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 NDUFV1P49821 464 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 SERPINB8P50452 374 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 SLC5A3P53794 718 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 IRX1P78414 480 aaPredicted RBP8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 NIPAL4Q0D2K0 466 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 FAAP100Q0VG06 881 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 CRYMQ14894 314 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 KRT72Q14CN4 511 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 PARP15Q460N3 678 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 PLEKHG4Q58EX7 1191 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 C1orf53Q5VUE5 145 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 SNX30Q5VWJ9 437 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 CASC4Q6P4E1 433 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 CD300LGQ6UXG3 332 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 LRRC8DQ7L1W4 858 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 PRUNE1Q86TP1 453 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 CRLF3Q8IUI8 442 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 WDR75Q8IWA0 830 aaKnown RBP8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 BBS5Q8N3I7 341 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 ATPAF2Q8N5M1 289 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 RTL3Q8N8U3 475 aaKnown RBP8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 DNAAF3Q8N9W5 541 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 CCDC63Q8NA47 563 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 C3orf58Q8NDZ4 430 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 MGARPQ8TDB4 240 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 DPF3Q92784 378 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 CERS2Q96G23 380 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 SLC39A13Q96H72 371 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 TSNARE1Q96NA8 513 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 TOX2Q96NM4 488 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 RANBP9Q96S59 729 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 KCNK16Q96T55 309 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 LGMNQ99538 433 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 PAIP2Q9BPZ3 127 aaKnown RBP8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 DDX50Q9BQ39 737 aaKnown RBP8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 WDR83Q9BRX9 315 aaKnown RBP8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 KIFC1Q9BW19 673 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 WWP1Q9H0M0 922 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 KLC4Q9NSK0 619 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 LNPEPQ9UIQ6 1025 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 CORO1CQ9ULV4 474 aaPredicted RBP8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 BACE2Q9Y5Z0 518 aa8.91□□□□□ -0.98
SNRNP40-202ENST00000373720 IGLV3-10A0A075B6K4 115 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 GOLGA8QA0A0J9YX86 632 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 A0A1W2PPM1 405 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 GOLGA8OA6NCC3 632 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 GOLGA8NF8WBI6 632 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 CHUKO15111 745 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 MGRN1O60291 552 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 MGEA5O60502 916 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 SIN3BO75182 1162 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 WFS1O76024 890 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 NEBLO76041 1014 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 LATS1O95835 1130 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 LMNAP02545 664 aaKnown RBP8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 VAV1P15498 845 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 TFE3P19532 575 aaPredicted RBP8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 ADRA1DP25100 572 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 YWHAQP27348 245 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 CCND3P30281 292 aaPredicted RBP8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 FOXN2P32314 431 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 MAGEA12P43365 314 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 LIG3P49916 1009 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 TUBP50607 506 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 PDE1BQ01064 536 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 CREMQ03060 361 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 RFTN1Q14699 578 aaPredicted RBP8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 LRRC14Q15048 493 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 TRIP4Q15650 581 aaPredicted RBP8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 TSNAXIP1Q2TAA8 658 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 C5orf22Q49AR2 442 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 METTL21CQ5VZV1 264 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 TRAF7Q6Q0C0 670 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 PACS1Q6VY07 963 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 DENND5BQ6ZUT9 1274 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 TAC4Q86UU9 113 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 NPAS4Q8IUM7 802 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 NUDCD3Q8IVD9 361 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 IGDCC3Q8IVU1 814 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 CNTN4Q8IWV2 1026 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 NDUFAF2Q8N183 169 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 C4orf33Q8N1A6 199 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 GDAP1Q8TB36 358 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 PPP4R1Q8TF05 950 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 ARNTL2Q8WYA1 636 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 LPPQ93052 612 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 E2F7Q96AV8 911 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 CCDC126Q96EE4 140 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 CFAP36Q96G28 342 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 OXNAD1Q96HP4 312 aaPredicted RBP8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 CAPNS2Q96L46 248 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 FAM167BQ9BTA0 163 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 TTLL2Q9BWV7 592 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 ZYG11BQ9C0D3 744 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 SLC25A51Q9H1U9 297 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 ARHGEF3Q9NR81 526 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 TMEM248Q9NWD8 314 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 RNF186Q9NXI6 227 aa8.9□□□□□ -0.98
SNRNP40-202ENST00000373720 HACD3Q9P035 362 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms