RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 NUP205Q92621 2012 aa16.23■□□□□ 0.19
TMEM53-204ENST00000372243 BCLAF3A2AJT9 711 aaKnown RBP16.22■□□□□ 0.19
TMEM53-204ENST00000372243 OTOL1A6NHN0 477 aaPredicted RBP16.22■□□□□ 0.19
TMEM53-204ENST00000372243 EIF2DP41214 584 aaKnown RBP16.22■□□□□ 0.19
TMEM53-204ENST00000372243 PAPOLAP51003 745 aaKnown RBP16.22■□□□□ 0.19
TMEM53-204ENST00000372243 SERINC3Q13530 473 aa16.22■□□□□ 0.19
TMEM53-204ENST00000372243 GAB4Q2WGN9 574 aa16.22■□□□□ 0.19
TMEM53-204ENST00000372243 KIAA0907Q7Z7F0 614 aaPredicted RBP16.22■□□□□ 0.19
TMEM53-204ENST00000372243 CDKL3Q8IVW4 592 aaPredicted RBP16.22■□□□□ 0.19
TMEM53-204ENST00000372243 TP53INP2Q8IXH6 220 aa16.22■□□□□ 0.19
TMEM53-204ENST00000372243 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.22■□□□□ 0.19
TMEM53-204ENST00000372243 ATXN2LQ8WWM7 1075 aaKnown RBP16.22■□□□□ 0.19
TMEM53-204ENST00000372243 DNASE1L2Q92874 299 aa16.22■□□□□ 0.19
TMEM53-204ENST00000372243 FATE1Q969F0 183 aa16.22■□□□□ 0.19
TMEM53-204ENST00000372243 MAGOHBQ96A72 148 aaKnown RBP16.22■□□□□ 0.19
TMEM53-204ENST00000372243 ALG14Q96F25 216 aa16.22■□□□□ 0.19
TMEM53-204ENST00000372243 HMCESQ96FZ2 354 aa16.22■□□□□ 0.19
TMEM53-204ENST00000372243 RUNDC3BQ96NL0 473 aa16.22■□□□□ 0.19
TMEM53-204ENST00000372243 FEM1AQ9BSK4 669 aa16.22■□□□□ 0.19
TMEM53-204ENST00000372243 CARD6Q9BX69 1037 aa16.22■□□□□ 0.19
TMEM53-204ENST00000372243 ACE2Q9BYF1 805 aaPredicted RBP16.22■□□□□ 0.19
TMEM53-204ENST00000372243 GTSE1Q9NYZ3 720 aa16.22■□□□□ 0.19
TMEM53-204ENST00000372243 FEZ2Q9UHY8 353 aaPredicted RBP16.22■□□□□ 0.19
TMEM53-204ENST00000372243 SLC27A6Q9Y2P4 619 aa16.22■□□□□ 0.19
TMEM53-204ENST00000372243 OR51B4Q9Y5P0 310 aa16.22■□□□□ 0.19
TMEM53-204ENST00000372243 A0A0D9SEW6 157 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 CXorf51AA0A1B0GTR3 108 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 DFFAO00273 331 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 MAFKO60675 156 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 MAP3K6O95382 1288 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 ITGAVP06756 1048 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 CCNCP24863 283 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 HLA-FP30511 346 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 GJA4P35212 333 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 COILP38432 576 aaPredicted RBP16.21■□□□□ 0.19
TMEM53-204ENST00000372243 LMNB2Q03252 620 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 ZP2Q05996 745 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 LMAN2Q12907 356 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 DMC1Q14565 340 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 PRKD1Q15139 912 aaPredicted RBP16.21■□□□□ 0.19
TMEM53-204ENST00000372243 SLC45A4Q5BKX6 768 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 RNF219Q5W0B1 726 aaPredicted RBP16.21■□□□□ 0.19
TMEM53-204ENST00000372243 CCDC137Q6PK04 289 aaKnown RBP16.21■□□□□ 0.19
TMEM53-204ENST00000372243 ZC3H18Q86VM9 953 aaKnown RBP16.21■□□□□ 0.19
TMEM53-204ENST00000372243 ATPAF2Q8N5M1 289 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 CSGALNACT1Q8TDX6 532 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 TFB1MQ8WVM0 346 aaKnown RBP16.21■□□□□ 0.19
TMEM53-204ENST00000372243 QKIQ96PU8 341 aaKnown RBP eCLIP16.21■□□□□ 0.19
TMEM53-204ENST00000372243 FAM118BQ9BPY3 351 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 MUC3BQ9H195 1237 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 PCYOX1Q9UHG3 505 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 NYNRINQ9P2P1 1898 aaKnown RBP16.21■□□□□ 0.19
TMEM53-204ENST00000372243 COL4A2P08572 1712 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 KIAA1549LQ6ZVL6 1849 aa16.21■□□□□ 0.19
TMEM53-204ENST00000372243 CFAP69A5D8W1 941 aa16.21■□□□□ 0.18
TMEM53-204ENST00000372243 H7C0C1 242 aa16.21■□□□□ 0.18
TMEM53-204ENST00000372243 TULP3O75386 442 aa16.21■□□□□ 0.18
TMEM53-204ENST00000372243 CISD3P0C7P0 127 aa16.21■□□□□ 0.18
TMEM53-204ENST00000372243 STIP1P31948 543 aaKnown RBP16.21■□□□□ 0.18
TMEM53-204ENST00000372243 CSKP41240 450 aa16.21■□□□□ 0.18
TMEM53-204ENST00000372243 ATP5OP48047 213 aa16.21■□□□□ 0.18
TMEM53-204ENST00000372243 DGKGP49619 791 aa16.21■□□□□ 0.18
TMEM53-204ENST00000372243 IL10RBQ08334 325 aa16.21■□□□□ 0.18
TMEM53-204ENST00000372243 TDGQ13569 410 aa16.21■□□□□ 0.18
TMEM53-204ENST00000372243 TIGD7Q6NT04 549 aaPredicted RBP16.21■□□□□ 0.18
TMEM53-204ENST00000372243 DCAF4L2Q8NA75 395 aa16.21■□□□□ 0.18
TMEM53-204ENST00000372243 CCNYQ8ND76 341 aa16.21■□□□□ 0.18
TMEM53-204ENST00000372243 ATL2Q8NHH9 583 aa16.21■□□□□ 0.18
TMEM53-204ENST00000372243 GRK7Q8WTQ7 553 aa16.21■□□□□ 0.18
TMEM53-204ENST00000372243 SLCO2A1Q92959 643 aa16.21■□□□□ 0.18
TMEM53-204ENST00000372243 ACDQ96AP0 544 aa16.21■□□□□ 0.18
TMEM53-204ENST00000372243 LGMNQ99538 433 aa16.21■□□□□ 0.18
TMEM53-204ENST00000372243 FERMT1Q9BQL6 677 aa16.21■□□□□ 0.18
TMEM53-204ENST00000372243 DDX47Q9H0S4 455 aaKnown RBP16.21■□□□□ 0.18
TMEM53-204ENST00000372243 ABCB8Q9NUT2 735 aa16.21■□□□□ 0.18
TMEM53-204ENST00000372243 IPO11Q9UI26 975 aaKnown RBP16.21■□□□□ 0.18
TMEM53-204ENST00000372243 GGA2Q9UJY4 613 aa16.21■□□□□ 0.18
TMEM53-204ENST00000372243 C19orf67A6NJJ6 358 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.2■□□□□ 0.18
TMEM53-204ENST00000372243 MTSS1O43312 755 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 KDELR3O43731 214 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 PABPC1P11940 636 aaKnown RBP16.2■□□□□ 0.18
TMEM53-204ENST00000372243 MZF1P28698 734 aaPredicted RBP16.2■□□□□ 0.18
TMEM53-204ENST00000372243 CD70P32970 193 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 ACVRL1P37023 503 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 PFKPQ01813 784 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 C2orf54Q08AI8 447 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 SNX1Q13596 522 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 PLEKHG6Q3KR16 790 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 PREPLQ4J6C6 727 aaPredicted RBP16.2■□□□□ 0.18
TMEM53-204ENST00000372243 HEATR6Q6AI08 1181 aaKnown RBP16.2■□□□□ 0.18
TMEM53-204ENST00000372243 IL31Q6EBC2 164 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 ASTLQ6HA08 431 aaPredicted RBP16.2■□□□□ 0.18
TMEM53-204ENST00000372243 TTC27Q6P3X3 843 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 DARS2Q6PI48 645 aaKnown RBP16.2■□□□□ 0.18
TMEM53-204ENST00000372243 CCDC13Q8IYE1 715 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 MMGT1Q8N4V1 131 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 NAT16Q8N8M0 369 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 NETO2Q8NC67 525 aa16.2■□□□□ 0.18
TMEM53-204ENST00000372243 OR7D4Q8NG98 312 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms