RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 TWF2Q6IBS0 349 aaKnown RBP7.06□□□□□ -1.28
CSDE1-204ENST00000369530 GPRIN1Q7Z2K8 1008 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 FRMD5Q7Z6J6 570 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 CPSF7Q8N684 471 aaKnown RBP7.06□□□□□ -1.28
CSDE1-204ENST00000369530 DNASE1L2Q92874 299 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 SKA1Q96BD8 255 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 TCEAL4Q96EI5 215 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 MYO19Q96H55 970 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 RIPOR3Q96MK2 946 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 POP1Q99575 1024 aaKnown RBP7.06□□□□□ -1.28
CSDE1-204ENST00000369530 NEURL2Q9BR09 285 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 DPEP3Q9H4B8 488 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 CYLDQ9NQC7 956 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 TOPORSQ9NS56 1045 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-204ENST00000369530 PADI4Q9UM07 663 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 LRRIQ4A6NIV6 560 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 A8MXQ7 604 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 KPNA7A9QM74 516 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 F8W8V4 182 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 BOLA2-SMG1P6H3BVE0 249 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 CLDN3O15551 220 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 ENDOD1O94919 500 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 CXCL14O95715 111 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 SMIM18P0DKX4 95 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 S100A5P33763 92 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 E2F2Q14209 437 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 ASTE1Q2TB18 679 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-204ENST00000369530 FAM91A1Q658Y4 838 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 SCD5Q86SK9 330 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 KBTBD2Q8IY47 623 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 UBALD2Q8IYN6 164 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 CYP4X1Q8N118 509 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 KIF2BQ8N4N8 673 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 ACTRT1Q8TDG2 376 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 WBP2Q969T9 261 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 VTI1AQ96AJ9 217 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 CEP63Q96MT8 703 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 COLEC11Q9BWP8 271 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 ELOVL4Q9GZR5 314 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 GIN1Q9NXP7 522 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 MYOFQ9NZM1 2061 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 CASTOR2A6NHX0 329 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 SLC22A1O15245 554 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 NARSO43776 548 aaKnown RBP7.06□□□□□ -1.28
CSDE1-204ENST00000369530 OXSR1O95747 527 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-204ENST00000369530 NFKBIAP25963 317 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 AP3M2P53677 418 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 TNNC1P63316 161 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 FXNQ16595 210 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 PATL1Q86TB9 770 aaKnown RBP7.06□□□□□ -1.28
CSDE1-204ENST00000369530 SPERTQ8NA61 448 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 ACMSDQ8TDX5 336 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 SLC35F5Q8WV83 523 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 CKAP2Q8WWK9 683 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 SDCCAG3Q96C92 435 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 IER2Q9BTL4 223 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 NHEJ1Q9H9Q4 299 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-204ENST00000369530 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.06□□□□□ -1.284e-7■■■□□ 19.2
CSDE1-204ENST00000369530 CRNNQ9UBG3 495 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-204ENST00000369530 ZMAT5Q9UDW3 170 aaKnown RBP7.06□□□□□ -1.28
CSDE1-204ENST00000369530 STARD13Q9Y3M8 1113 aa7.06□□□□□ -1.28
CSDE1-204ENST00000369530 BRWD1Q9NSI6 2320 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 TM4SF5O14894 197 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 RAD51CO43502 376 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 ZC3H11AO75152 810 aaKnown RBP eCLIP7.05□□□□□ -1.285e-6■□□□□ 9.7
CSDE1-204ENST00000369530 MTHFRP42898 656 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 ACOT2P49753 483 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 PSMD5Q16401 504 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 TRNP1Q6NT89 227 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 PARM1Q6UWI2 310 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 SV2AQ7L0J3 742 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 NLRP9Q7RTR0 991 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 SUMF1Q8NBK3 374 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 PYROXD1Q8WU10 500 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 SENP8Q96LD8 212 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 CTRCQ99895 268 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 ORAI3Q9BRQ5 295 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 SLC39A3Q9BRY0 314 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 KLHL4Q9C0H6 718 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 KCNK12Q9HB15 430 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 TRPC7Q9HCX4 862 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 DMTF1Q9Y222 760 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 NOX1Q9Y5S8 564 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 NUP210LQ5VU65 1888 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 INO80B-WBP1J3KQ70 363 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 KRT13P13646 458 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 ZNF12P17014 697 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 PNPLA4P41247 253 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 RASSF2P50749 326 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 VCPP55072 806 aaKnown RBP7.05□□□□□ -1.28
CSDE1-204ENST00000369530 BFSP1Q12934 665 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 FAM78AQ5JUQ0 283 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 MEI1Q5TIA1 1274 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 RHOT2Q8IXI1 618 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 RIBC1Q8N443 379 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-204ENST00000369530 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.05□□□□□ -1.283e-12■□□□□ 9.4
CSDE1-204ENST00000369530 URGCPQ8TCY9 931 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 SPOCK2Q92563 424 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 SLC39A13Q96H72 371 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 ANKRD36BP1Q96IX9 119 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms