RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 MRPL47Q9HD33 250 aaKnown RBP10.13□□□□□ -0.79
CD48-202ENST00000368046 PARD6AQ9NPB6 346 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 WSB2Q9NYS7 404 aaPredicted RBP10.13□□□□□ -0.79
CD48-202ENST00000368046 MPP6Q9NZW5 540 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 MBD1Q9UIS9 605 aaPredicted RBP10.13□□□□□ -0.79
CD48-202ENST00000368046 USP18Q9UMW8 372 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 CYP8B1Q9UNU6 501 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 SNX10Q9Y5X0 201 aa10.13□□□□□ -0.79
CD48-202ENST00000368046 KIAA1549LQ6ZVL6 1849 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 ILVBLA1L0T0 632 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 TTC34A8MYJ7 566 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 PRR5-ARHGAP8B1AHC4 643 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 CCP110O43303 1012 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 RHOCP08134 193 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 PLEKP08567 350 aaPredicted RBP10.12□□□□□ -0.79
CD48-202ENST00000368046 MYBL1P10243 752 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 OR1E1P30953 314 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 DHPSP49366 369 aaPredicted RBP10.12□□□□□ -0.79
CD48-202ENST00000368046 TPMTP51580 245 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 AIF1P55008 147 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 KRT83P78385 493 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 ARHGAP8P85298 464 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 RPL6Q02878 288 aaKnown RBP10.12□□□□□ -0.79
CD48-202ENST00000368046 CREB5Q02930 508 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 SFSWAPQ12872 951 aaKnown RBP10.12□□□□□ -0.79
CD48-202ENST00000368046 TRIM14Q14142 442 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 TSR1Q2NL82 804 aaKnown RBP10.12□□□□□ -0.79
CD48-202ENST00000368046 PLA2G2CQ5R387 149 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 ARTNQ5T4W7 220 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 TMEFF1Q8IYR6 380 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 ZNF366Q8N895 744 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 PTPRN2Q92932 1015 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 ZNF419Q96HQ0 510 aaPredicted RBP10.12□□□□□ -0.79
CD48-202ENST00000368046 MAGEB5Q9BZ81 275 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 MUC3BQ9H195 1237 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 VPS45Q9NRW7 570 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 USP36Q9P275 1121 aaKnown RBP10.12□□□□□ -0.79
CD48-202ENST00000368046 CNOT8Q9UFF9 292 aaKnown RBP10.12□□□□□ -0.79
CD48-202ENST00000368046 VPS28Q9UK41 221 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 SCINQ9Y6U3 715 aa10.12□□□□□ -0.79
CD48-202ENST00000368046 ZNF292O60281 2723 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 A0A087X0T9 212 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 EDDM13A0A1B0GTR0 161 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 FAM72CH0Y354 149 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 ATP9BO43861 1147 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 RNASEH1O60930 286 aaKnown RBP10.11□□□□□ -0.79
CD48-202ENST00000368046 SIN3BO75182 1162 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 NDUFS2O75306 463 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 RNF8O76064 485 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 IGLV3-19P01714 112 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 DNTTP04053 509 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 FAM228BP0C875 321 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 RHOQP17081 205 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 SDHBP21912 280 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 CD6P30203 668 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 L1CAMP32004 1257 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 MPLP40238 635 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 DPP6P42658 865 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 RPS14P62263 151 aaKnown RBP10.11□□□□□ -0.79
CD48-202ENST00000368046 OGDHQ02218 1023 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 LMNB2Q03252 620 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 SLC20A2Q08357 652 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 SCAPQ12770 1279 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 ACAP1Q15027 740 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 ACCSLQ4AC99 568 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 CCDC122Q5T0U0 273 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 C9orf64Q5T6V5 341 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 FAM72AQ5TYM5 149 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 MANEALQ5VSG8 457 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 FAM72DQ6L9T8 149 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 ALKBH5Q6P6C2 394 aaKnown RBP10.11□□□□□ -0.79
CD48-202ENST00000368046 ZNF783Q6ZMS7 281 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 NYAP1Q6ZVC0 841 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 TMC6Q7Z403 805 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 TFAP2DQ7Z6R9 452 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 FAM72BQ86X60 149 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 DNAAF5Q86Y56 855 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 VSTM4Q8IW00 320 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 CCDC185Q8N715 623 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 CADM4Q8NFZ8 388 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 FNIP1Q8TF40 1166 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 FOXJ1Q92949 421 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 TOE1Q96GM8 510 aaKnown RBP10.11□□□□□ -0.79
CD48-202ENST00000368046 FAM129BQ96TA1 746 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 NCAPGQ9BPX3 1015 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 C2orf49Q9BVC5 232 aaPredicted RBP10.11□□□□□ -0.79
CD48-202ENST00000368046 RSPH9Q9H1X1 276 aaPredicted RBP10.11□□□□□ -0.79
CD48-202ENST00000368046 MTG2Q9H4K7 406 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 ARHGAP20Q9P2F6 1191 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 MYO1AQ9UBC5 1043 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 ZNF212Q9UDV6 495 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 SLC25A13Q9UJS0 675 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 FZD10Q9ULW2 581 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 SCML1Q9UN30 329 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 FRYLO94915 3013 aa10.11□□□□□ -0.79
CD48-202ENST00000368046 RIF1Q5UIP0 2472 aaKnown RBP10.1□□□□□ -0.79
CD48-202ENST00000368046 A0A0D9SEW6 157 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 LRIG2O94898 1065 aa10.1□□□□□ -0.79
CD48-202ENST00000368046 TPM1P09493 284 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms