RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 GAGE1Q13065 139 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 GAGE4Q13068 117 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 DNASE1L3Q13609 305 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 IL10RAQ13651 578 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 RAPSNQ13702 412 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 ENPP2Q13822 863 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 GALNT3Q14435 633 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 PCBP1Q15365 356 aaKnown RBP eCLIP0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 INSCQ1MX18 579 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 ZNF284Q2VY69 593 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 PLA1AQ53H76 456 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 IRAK1BP1Q5VVH5 260 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 RSBN1Q5VWQ0 802 aaPredicted RBP0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 HEPHL1Q6MZM0 1159 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 FAM122CQ6P4D5 195 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 ZNF790Q6PG37 636 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 DOK6Q6PKX4 331 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 MON1BQ7L1V2 547 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 KRT77Q7Z794 578 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 SLC9B2Q86UD5 537 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 PPM1NQ8N819 430 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 ZNF441Q8N8Z8 693 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 PPHLN1Q8NEY8 458 aaKnown RBP0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 OR52N4Q8NGI2 321 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 OR1N1Q8NGS0 311 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 ASB12Q8WXK4 309 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 TMEM190Q8WZ59 177 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 KAT2AQ92830 837 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 KAT5Q92993 513 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 C18orf12Q96KH6 178 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 B3GALT6Q96L58 329 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 CNOT6LQ96LI5 555 aaKnown RBP0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 SRPK1Q96SB4 655 aaKnown RBP0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 DMRTA2Q96SC8 542 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 TTC1Q99614 292 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 GPATCH1Q9BRR8 931 aaKnown RBP0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 MMTAG2Q9BU76 263 aaKnown RBP0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 RPP25Q9BUL9 199 aaKnown RBP0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 RAB11FIP5Q9BXF6 653 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 TRIM5Q9C035 493 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 BTBD1Q9H0C5 482 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 PLEKHA4Q9H4M7 779 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 KLHL31Q9H511 634 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 EPS8L2Q9H6S3 715 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 IFT22Q9H7X7 185 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 MYOZ2Q9NPC6 264 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 ZNF277Q9NRM2 450 aaPredicted RBP0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 CNNM1Q9NRU3 951 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 INTS10Q9NVR2 710 aaKnown RBP0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 C2orf42Q9NWW7 574 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 SMARCAL1Q9NZC9 954 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 ZNF224Q9NZL3 707 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 ZNF624Q9P2J8 865 aaPredicted RBP0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 ABCF2Q9UG63 623 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 RASAL2Q9UJF2 1139 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 RIMKLBQ9ULI2 386 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 PAXBP1Q9Y5B6 917 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 FBN3Q75N90 2809 aa0.21□□□□□ -2.38
RNU6-54P-201ENST00000365563 OTOGLQ3ZCN5 2332 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 WASHC2AQ641Q2 1341 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 C1orf226A1L170 272 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 FAM220BPB1ANY3 271 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 SMIM1B2RUZ4 78 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 RASA4BC9J798 803 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 TRAFD1O14545 582 aaPredicted RBP0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 KIF3BO15066 747 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 HTRA2O43464 458 aaPredicted RBP0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 LDB2O43679 373 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 NDUFS2O75306 463 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 NEURL1O76050 574 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 CH25HO95992 272 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 MBPP02686 304 aaPredicted RBP0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 AHSGP02765 367 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 IGHV4-30-4P0DP06 118 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 PDIA4P13667 645 aaKnown RBP0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 TRIM27P14373 513 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 GNB3P16520 340 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 BPIP17213 487 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 TGM2P21980 687 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 RBL1P28749 1068 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 FMO4P31512 558 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 TNFSF8P32971 234 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 STAT1P42224 750 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 GPR3P46089 330 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 SLC11A2P49281 568 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 AGFG1P52594 562 aaKnown RBP0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 LIMK2P53671 638 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 UCP3P55916 312 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 DHX34Q14147 1143 aaKnown RBP0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 TMEM187Q14656 261 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 DHCR24Q15392 516 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 NFE2L2Q16236 605 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 PTCHD3Q3KNS1 767 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 C3orf36Q3SXR2 165 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 HIGD2BQ4VC39 106 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 FHL5Q5TD97 284 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 LMBRD2Q68DH5 695 aaPredicted RBP0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 SLC27A1Q6PCB7 646 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 PAQR6Q6TCH4 344 aa0.2□□□□□ -2.38
RNU6-54P-201ENST00000365563 KLHL24Q6TFL4 600 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms