RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 UBAP2Q5T6F2 1119 aaKnown RBP4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 VWA5B1Q5TIE3 1220 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 ITPRIPL1Q6GPH6 555 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 NAPEPLDQ6IQ20 393 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 AADACL2Q6P093 401 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 CRIP3Q6Q6R5 217 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 ATF7IPQ6VMQ6 1270 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 RANBP10Q6VN20 620 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 TFAP2DQ7Z6R9 452 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 MON1AQ86VX9 555 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 TICAM2Q86XR7 235 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 PAQR4Q8N4S7 273 aaPredicted RBP4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 OR52N4Q8NGI2 321 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 NOC3LQ8WTT2 800 aaKnown RBP4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 RAB40AQ8WXH6 277 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 NEUROD6Q96NK8 337 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 NR1H4Q96RI1 486 aaPredicted RBP4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 ZNF347Q96SE7 839 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 KCND2Q9NZV8 630 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 SARDHQ9UL12 918 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 MAFFQ9ULX9 164 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 SLC45A1Q9Y2W3 748 aa4.07□□□□□ -1.76
RNU6-28P-201ENST00000362378 EMSYQ7Z589 1322 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 A0A1W2PQM1 296 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 FSD2A1L4K1 749 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 A6NCN8 305 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 TARM1B6A8C7 271 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 TMEM232C9JQI7 657 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 RRHO14718 337 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 PER2O15055 1255 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 FOXN1O15353 648 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 GFPT2O94808 682 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 HLA-DQA2P01906 255 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 HSPA1AP0DMV8 641 aaKnown RBP4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 HSPA1BP0DMV9 641 aaKnown RBP4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 LAMP2P13473 410 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 COX7A2P14406 83 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 INSRRP14616 1297 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 TYK2P29597 1187 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 UFM1P61960 85 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 SETQ01105 290 aaPredicted RBP4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 ABHD18Q0P651 414 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 EIF4A2Q14240 407 aaKnown RBP4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 IL13RA2Q14627 380 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 KCTD2Q14681 263 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 KPNB1Q14974 876 aaKnown RBP4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 TBCEQ15813 527 aaPredicted RBP4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 SLC18A3Q16572 532 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 AP5B1Q2VPB7 878 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 ANXA2RQ3ZCQ2 193 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 AWAT1Q58HT5 328 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 SNX30Q5VWJ9 437 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 FAM205BPQ63HN1 556 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 SLC30A9Q6PML9 568 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 C16orf54Q6UWD8 224 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 SERPINA13PQ6UXR4 307 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 B4GALNT4Q76KP1 1039 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 RNF144BQ7Z419 303 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 RHPN2Q8IUC4 686 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 ADSSL1Q8N142 457 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 SETD9Q8NE22 299 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 METTL6Q8TCB7 284 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 ZNF398Q8TD17 642 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 CREB3L4Q8TEY5 395 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 SNRNP27Q8WVK2 155 aaKnown RBP4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 ZFPM2Q8WW38 1151 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 CNOT9Q92600 299 aaKnown RBP4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 ZNF764Q96H86 408 aaPredicted RBP4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 CADM1Q9BY67 442 aaKnown RBP4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 SLC25A18Q9H1K4 315 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 TTYH1Q9H313 450 aaPredicted RBP4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 EPHX3Q9H6B9 360 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 Q9N2J8 555 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 KRT84Q9NSB2 600 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 ARL8BQ9NVJ2 186 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 ARL15Q9NXU5 204 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 SH3BP4Q9P0V3 963 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 NRBP1Q9UHY1 535 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 CAMK2AQ9UQM7 478 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 PSAT1Q9Y617 370 aa4.06□□□□□ -1.76
RNU6-28P-201ENST00000362378 C17orf113A0A1B0GUU1 675 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 DYTNA2CJ06 578 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 TMEM247A6NEH6 219 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 NPIPB15A6NHN6 443 aaPredicted RBP4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 UBE2Q2LH0YL09 131 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 MATN3O15232 486 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 HBP1O60381 514 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 DOK2O60496 412 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 PTP4A3O75365 173 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 GCP02774 474 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 AKR1A1P14550 325 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 RPS6KB1P23443 525 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 RGS2P41220 211 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 STAT1P42224 750 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 DRG2P55039 364 aaKnown RBP4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 RHAGQ02094 409 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 ZBTB16Q05516 673 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 MEA1Q16626 185 aa4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 CC2D1BQ5T0F9 858 aaKnown RBP4.05□□□□□ -1.76
RNU6-28P-201ENST00000362378 DHRS13Q6UX07 377 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms