RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 PLIN3O60664 434 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 TSHRP16473 764 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 CDH13P55290 713 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 TRAF2Q12933 501 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 DLG1Q12959 904 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 CA9Q16790 459 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 SV2CQ496J9 727 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 DNAJC14Q6Y2X3 702 aaPredicted RBP14.15□□□□□ -0.14
COL6A1-201ENST00000361866 CDHR3Q6ZTQ4 885 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 UTS2BQ765I0 119 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 MIB1Q86YT6 1006 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 LENG1Q96BZ8 264 aaPredicted RBP14.15□□□□□ -0.14
COL6A1-201ENST00000361866 MRIQ9BWK5 157 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 SPATC1LQ9H0A9 340 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 H3BRB1 525 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 NFKB1P19838 968 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 MMP14P50281 582 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 MTX3Q5HYI7 312 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 TLDC1Q6P9B6 456 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 DRICH1Q6PGQ1 229 aaPredicted RBP14.15□□□□□ -0.14
COL6A1-201ENST00000361866 MAGEE2Q8TD90 523 aaPredicted RBP14.15□□□□□ -0.14
COL6A1-201ENST00000361866 RNF145Q96MT1 663 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 C17orf80Q9BSJ5 609 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 TUT1Q9H6E5 874 aaKnown RBP14.15□□□□□ -0.14
COL6A1-201ENST00000361866 TMEM165Q9HC07 324 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 ABT1Q9ULW3 272 aaKnown RBP14.15□□□□□ -0.14
COL6A1-201ENST00000361866 FAM95CA0A1B0GW59 222 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 C16orf96A6NNT2 1141 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 TBC1D4O60343 1298 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 TRPC1P48995 793 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 NR1H2P55055 460 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 NUP107P57740 925 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 MAPK11Q15759 364 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 TMEM198Q66K66 360 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 PIGZQ86VD9 579 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 DSELQ8IZU8 1212 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 FAM47BQ8NA70 645 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 UBE2OQ9C0C9 1292 aaKnown RBP14.15□□□□□ -0.14
COL6A1-201ENST00000361866 NT5MQ9NPB1 228 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 HMGXB4Q9UGU5 601 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 DOLKQ9UPQ8 538 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 EFR3BQ9Y2G0 817 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 AAR2Q9Y312 384 aaKnown RBP14.15□□□□□ -0.14
COL6A1-201ENST00000361866 PPME1Q9Y570 386 aa14.15□□□□□ -0.14
COL6A1-201ENST00000361866 PTPRJQ12913 1337 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 TK2O00142 265 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 KLF1Q13351 362 aaPredicted RBP14.14□□□□□ -0.15
COL6A1-201ENST00000361866 BFSP2Q13515 415 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 PMF1Q6P1K2 205 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 ASRGL1Q7L266 308 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 STK32CQ86UX6 486 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 C1orf127Q8N9H9 656 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 PCDH19Q8TAB3 1148 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 DACH2Q96NX9 599 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 MID1IP1Q9NPA3 183 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 LATS2Q9NRM7 1088 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 ITGA11Q9UKX5 1188 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 RGPD5Q99666 1765 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 H2AFYO75367 372 aaKnown RBP14.14□□□□□ -0.15
COL6A1-201ENST00000361866 RTN3O95197 1032 aaPredicted RBP14.14□□□□□ -0.15
COL6A1-201ENST00000361866 ERCC2P18074 760 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 GK5Q6ZS86 529 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 PSTKQ8IV42 348 aaKnown RBP14.14□□□□□ -0.15
COL6A1-201ENST00000361866 UTP4Q969X6 686 aaKnown RBP14.14□□□□□ -0.15
COL6A1-201ENST00000361866 CDH19Q9H159 772 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 NOL11Q9H8H0 719 aaKnown RBP14.14□□□□□ -0.15
COL6A1-201ENST00000361866 ATXN10Q9UBB4 475 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 PSMD3O43242 534 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 TIPRLO75663 272 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 CCR1P32246 355 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 PPARGP37231 505 aaPredicted RBP14.14□□□□□ -0.15
COL6A1-201ENST00000361866 PLEKHG4Q58EX7 1191 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 ARL13AQ5H913 290 aaPredicted RBP14.14□□□□□ -0.15
COL6A1-201ENST00000361866 C2orf69Q8N8R5 385 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 DNAJB14Q8TBM8 379 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 ZNF670Q9BS34 389 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 NTPCRQ9BSD7 190 aaKnown RBP14.14□□□□□ -0.15
COL6A1-201ENST00000361866 SPATA16Q9BXB7 569 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 ULBP1Q9BZM6 244 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 SLC15A5A6NIM6 579 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 H0Y626 953 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 FKBP9O95302 570 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 TRIM16O95361 564 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 DLDP09622 509 aaKnown RBP14.14□□□□□ -0.15
COL6A1-201ENST00000361866 USP17L7P0C7H9 530 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 CLK1P49759 484 aaKnown RBP14.14□□□□□ -0.15
COL6A1-201ENST00000361866 LAMC2Q13753 1193 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 AASDHQ4L235 1098 aaPredicted RBP14.14□□□□□ -0.15
COL6A1-201ENST00000361866 SCIMPQ6UWF3 145 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 FKBP9P1Q75LS8 142 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 ACMSDQ8TDX5 336 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 FAM162AQ96A26 154 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 APOL5Q9BWW9 433 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 DGCR6LQ9BY27 220 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 CHRAC1Q9NRG0 131 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 BLOC1S6Q9UL45 172 aa14.14□□□□□ -0.15
COL6A1-201ENST00000361866 MT-ND1P03886 318 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 PYGLP06737 847 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 TUBP50607 506 aa14.13□□□□□ -0.15
COL6A1-201ENST00000361866 CGB2Q6NT52 195 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms