RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 GBA3Q9H227 469 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 NUDT5Q9UKK9 219 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 PSAT1Q9Y617 370 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 RPS6KL1Q9Y6S9 549 aa23.11■■□□□ 1.29
LDB1-201ENST00000361198 MTSS1O43312 755 aa23.1■■□□□ 1.29
LDB1-201ENST00000361198 MSI1O43347 362 aaKnown RBP23.1■■□□□ 1.29
LDB1-201ENST00000361198 NOGQ13253 232 aa23.1■■□□□ 1.29
LDB1-201ENST00000361198 SCD5Q86SK9 330 aa23.1■■□□□ 1.29
LDB1-201ENST00000361198 STKLD1Q8NE28 680 aa23.1■■□□□ 1.29
LDB1-201ENST00000361198 CASP10Q92851 521 aa23.1■■□□□ 1.29
LDB1-201ENST00000361198 PRR11Q96HE9 360 aaPredicted RBP23.1■■□□□ 1.29
LDB1-201ENST00000361198 MLPHQ9BV36 600 aaPredicted RBP23.1■■□□□ 1.29
LDB1-201ENST00000361198 MMADHCQ9H3L0 296 aaPredicted RBP23.1■■□□□ 1.29
LDB1-201ENST00000361198 KCNK4Q9NYG8 393 aa23.1■■□□□ 1.29
LDB1-201ENST00000361198 SIRPGQ9P1W8 387 aa23.1■■□□□ 1.29
LDB1-201ENST00000361198 SUFUQ9UMX1 484 aa23.1■■□□□ 1.29
LDB1-201ENST00000361198 TOP3BO95985 862 aaKnown RBP23.1■■□□□ 1.29
LDB1-201ENST00000361198 NFKB1P19838 968 aa23.1■■□□□ 1.29
LDB1-201ENST00000361198 OR1G1P47890 313 aa23.1■■□□□ 1.29
LDB1-201ENST00000361198 NOMO2Q5JPE7 1267 aa23.1■■□□□ 1.29
LDB1-201ENST00000361198 PACS1Q6VY07 963 aa23.1■■□□□ 1.29
LDB1-201ENST00000361198 TIFABQ6ZNK6 161 aa23.1■■□□□ 1.29
LDB1-201ENST00000361198 SCN4BQ8IWT1 228 aa23.1■■□□□ 1.29
LDB1-201ENST00000361198 COLGALT2Q8IYK4 626 aa23.1■■□□□ 1.29
LDB1-201ENST00000361198 NMUR1Q9HB89 426 aa23.1■■□□□ 1.29
LDB1-201ENST00000361198 ABI2Q9NYB9 513 aaPredicted RBP23.1■■□□□ 1.29
LDB1-201ENST00000361198 TAS2R1Q9NYW7 299 aa23.1■■□□□ 1.29
LDB1-201ENST00000361198 DNAJB4Q9UDY4 337 aa23.1■■□□□ 1.29
LDB1-201ENST00000361198 TRHDEQ9UKU6 1024 aa23.1■■□□□ 1.29
LDB1-201ENST00000361198 GYG2O15488 501 aa23.09■■□□□ 1.29
LDB1-201ENST00000361198 POLBP06746 335 aa23.09■■□□□ 1.29
LDB1-201ENST00000361198 CNTFP26441 200 aa23.09■■□□□ 1.29
LDB1-201ENST00000361198 GCKP35557 465 aa23.09■■□□□ 1.29
LDB1-201ENST00000361198 PTDSS1P48651 473 aaKnown RBP23.09■■□□□ 1.29
LDB1-201ENST00000361198 BLMHQ13867 455 aa23.09■■□□□ 1.29
LDB1-201ENST00000361198 KHDC1Q4VXA5 237 aaKnown RBP23.09■■□□□ 1.29
LDB1-201ENST00000361198 RFWD3Q6PCD5 774 aa23.09■■□□□ 1.29
LDB1-201ENST00000361198 CD99L2Q8TCZ2 262 aa23.09■■□□□ 1.29
LDB1-201ENST00000361198 TEKT5Q96M29 485 aa23.09■■□□□ 1.29
LDB1-201ENST00000361198 FCRL3Q96P31 734 aaPredicted RBP23.09■■□□□ 1.29
LDB1-201ENST00000361198 TBC1D13Q9NVG8 400 aa23.09■■□□□ 1.29
LDB1-201ENST00000361198 PRG3Q9Y2Y8 225 aaPredicted RBP23.09■■□□□ 1.29
LDB1-201ENST00000361198 PAGE1O75459 146 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 JCHAINP01591 159 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 ERVK-10P10266 1014 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 CYP2C18P33260 490 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 CDK18Q07002 472 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 DNAAF3Q8N9W5 541 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 VAT1Q99536 393 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 SMOC2Q9H3U7 446 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 CASS4Q9NQ75 786 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 VANGL2Q9ULK5 521 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 FAM237BA0A1B0GVD1 139 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 MOXD2PA6NHM9 499 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 FCHO1O14526 889 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 ALDOAP04075 364 aaKnown RBP23.08■■□□□ 1.29
LDB1-201ENST00000361198 CRHR1P34998 444 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 FAM189BP81408 668 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 BRMS1LQ5PSV4 323 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 SDHAF4Q5VUM1 108 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 ARHGAP36Q6ZRI8 547 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 RAB3IL1Q8TBN0 382 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 HAPLN3Q96S86 360 aa23.08■■□□□ 1.29
LDB1-201ENST00000361198 ARHGAP42A6NI28 874 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 OAZ2O95190 189 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 CCR1P32246 355 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 ABL2P42684 1182 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 OCRLQ01968 901 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 BST1Q10588 318 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 HSF5Q4G112 596 aaPredicted RBP23.07■■□□□ 1.28
LDB1-201ENST00000361198 ATG16L1Q676U5 607 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 ITPRIPL1Q6GPH6 555 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 TTC7BQ86TV6 843 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 E2F7Q96AV8 911 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 CERS2Q96G23 380 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 APOL2Q9BQE5 337 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 ZCWPW1Q9H0M4 648 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 UBP1Q9NZI7 540 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 BFARQ9NZS9 450 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 ZFATQ9P243 1243 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 MYO16Q9Y6X6 1858 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 ERI2A8K979 691 aaKnown RBP23.07■■□□□ 1.28
LDB1-201ENST00000361198 ESRRAP11474 423 aaPredicted RBP23.07■■□□□ 1.28
LDB1-201ENST00000361198 SPANXN3Q5MJ09 141 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 ARTNQ5T4W7 220 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 RINLQ6ZS11 566 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 TEX9Q8N6V9 391 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 CNTD1Q8N815 330 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 URGCPQ8TCY9 931 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 NMUR2Q9GZQ4 415 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 LRRC40Q9H9A6 602 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 OSER1Q9NX31 292 aa23.07■■□□□ 1.28
LDB1-201ENST00000361198 MRPL42Q9Y6G3 142 aaKnown RBP23.07■■□□□ 1.28
LDB1-201ENST00000361198 A0A1W2PQH9 124 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 C2orf71A6NGG8 1288 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 TMEM189-UBE2V1I3L0A0 370 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 DFFAO00273 331 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 ATP6V1C1P21283 382 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 CERCAMQ5T4B2 595 aa23.06■■□□□ 1.28
LDB1-201ENST00000361198 RASSF3Q86WH2 238 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms