RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 ANKRD53Q8N9V6 530 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 BCAS4Q8TDM0 211 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 C1orf54Q8WWF1 131 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 APBB2Q92870 758 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 TTC17Q96AE7 1141 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 ELMO3Q96BJ8 720 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 FAM84AQ96KN4 292 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 C8orf33Q9H7E9 229 aaPredicted RBP8.32□□□□□ -1.08
COMMD9-202ENST00000355500 CDHR5Q9HBB8 845 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 RCOR3Q9P2K3 495 aaPredicted RBP8.32□□□□□ -1.08
COMMD9-202ENST00000355500 SLC24A2Q9UI40 661 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 POLIQ9UNA4 740 aa8.32□□□□□ -1.08
COMMD9-202ENST00000355500 A0A087WUV0 522 aaPredicted RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 TRIM43BA6NCK2 446 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 C2CD4BA6NLJ0 364 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 SGK1O00141 431 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 KIAA0355O15063 1070 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 CDH16O75309 829 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 SPAG6O75602 509 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 CNOT4O95628 575 aaKnown RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 TRUB2O95900 331 aaKnown RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 ZNF865P0CJ78 1059 aaPredicted RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 CD58P19256 250 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 GPD1P21695 349 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 KDELR1P24390 212 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 LRPAP1P30533 357 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 HOXA11P31270 313 aaPredicted RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 CRYBB1P53674 252 aaPredicted RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 NFKB2Q00653 900 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 CUL3Q13618 768 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 AUHQ13825 339 aaKnown RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 SLC29A2Q14542 456 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 CCDC38Q502W7 563 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 IZUMO3Q5VZ72 239 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 MFSD7Q6UXD7 560 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 TADA2BQ86TJ2 420 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 CPNE8Q86YQ8 564 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 SH2D3CQ8N5H7 860 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 ZNF454Q8N9F8 522 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 RFWD2Q8NHY2 731 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 MYCBPAPQ8TBZ2 947 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 NCOR1P1Q9H4R4 102 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 SMYD3Q9H7B4 428 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 TRPV4Q9HBA0 871 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 SRA1Q9HD15 236 aaKnown RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 WDR6Q9NNW5 1121 aaKnown RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 ADGRE2Q9UHX3 823 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 PATJQ8NI35 1801 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 HTR3EA5X5Y0 456 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 PIRO00625 290 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 ALOX15BO15296 676 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 EOMESO95936 686 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 GSTA2P09210 222 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 SMIM10L2AP0DMW4 78 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 SMIM10L2BP0DMW5 78 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 POU2F1P14859 743 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 MX2P20592 715 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 AIF1P55008 147 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 MAGOHP61326 146 aaKnown RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 GEN1Q17RS7 908 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 GFOD2Q3B7J2 385 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 SEZ6Q53EL9 994 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 ODF2Q5BJF6 829 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 RNASEH2BQ5TBB1 312 aaKnown RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 GKAP1Q5VSY0 366 aaPredicted RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 TAF2Q6P1X5 1199 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 ANKRD33Q7Z3H0 272 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 TOP6BLQ8N6T0 577 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 ZNF473Q8WTR7 871 aaKnown RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 CENPIQ92674 756 aaPredicted RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 HSFY1Q96LI6 401 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 HS6ST2Q96MM7 605 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 CPXM1Q96SM3 734 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 ZNF670Q9BS34 389 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 YIPF4Q9BSR8 244 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 C11orf84Q9BUA3 381 aaPredicted RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 RHOBTB2Q9BYZ6 727 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 CYP4F12Q9HCS2 524 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 CYTH4Q9UIA0 394 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 PCDHGA2Q9Y5H1 932 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 ZNF286BP0CG31 522 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 TFEBP19484 476 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 WARSP23381 471 aaKnown RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 MLH1P40692 756 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 OR1G1P47890 313 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 ZNF135P52742 658 aaPredicted RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 C17orf67Q0P5P2 114 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 XRCC4Q13426 336 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 ITIH4Q14624 930 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 SV2CQ496J9 727 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 CFAP157Q5JU67 520 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 ZNF362Q5T0B9 420 aaPredicted RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 NEPROQ6NW34 567 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 ANKS3Q6ZW76 656 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 PLEKHM3Q6ZWE6 761 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 GALNTL5Q7Z4T8 443 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 ADAT2Q7Z6V5 191 aaKnown RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 ZNF598Q86UK7 904 aaKnown RBP8.31□□□□□ -1.08
COMMD9-202ENST00000355500 SPATA24Q86W54 205 aa8.31□□□□□ -1.08
COMMD9-202ENST00000355500 MAP7D3Q8IWC1 876 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms