RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SKP1P63208 163 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 FAAP100Q0VG06 881 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 ELAVL2Q12926 359 aaKnown RBP15.12■□□□□ 0.01
LMX1B-201ENST00000355497 PPIL2Q13356 520 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 STYK1Q6J9G0 422 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 CAPSLQ8WWF8 208 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 PIH1D1Q9NWS0 290 aaKnown RBP15.12■□□□□ 0.01
LMX1B-201ENST00000355497 CLN6Q9NWW5 311 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 DPP7Q9UHL4 492 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 DMGDHQ9UI17 866 aaKnown RBP15.12■□□□□ 0.01
LMX1B-201ENST00000355497 CDH9Q9ULB4 789 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 CRYL1Q9Y2S2 319 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 HIST1H2ABP04908 130 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 CRATP43155 626 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 ZNF844Q08AG5 666 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 ZCCHC23Q6ZST2 131 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 HIST3H2AQ7L7L0 130 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 IFNLR1Q8IU57 520 aaPredicted RBP15.12■□□□□ 0.01
LMX1B-201ENST00000355497 HIST1H2ACQ93077 130 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 SMARCD1Q96GM5 515 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 SERPINB11Q96P15 392 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 THG1LQ9NWX6 298 aaKnown RBP15.12■□□□□ 0.01
LMX1B-201ENST00000355497 SNCAIPQ9Y6H5 919 aa15.12■□□□□ 0.01
LMX1B-201ENST00000355497 AKAP3O75969 853 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 CBX6O95503 412 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 POLD2P49005 469 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 DCTN2Q13561 401 aaKnown RBP15.11■□□□□ 0.01
LMX1B-201ENST00000355497 CRY1Q16526 586 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 RNF44Q7L0R7 432 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 C4orf19Q8IY42 314 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 LACRTQ9GZZ8 138 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 PXMP2Q9NR77 195 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 TAF6LQ9Y6J9 622 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 SSNA1O43805 119 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 RECQL5O94762 991 aaPredicted RBP15.11■□□□□ 0.01
LMX1B-201ENST00000355497 PROCP04070 461 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 MAPTP10636 758 aaKnown RBP15.11■□□□□ 0.01
LMX1B-201ENST00000355497 AMPD1P23109 780 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 SSTR1P30872 391 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 GCLCP48506 637 aaPredicted RBP15.11■□□□□ 0.01
LMX1B-201ENST00000355497 CHN2P52757 468 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 COPZ1P61923 177 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 ARF5P84085 180 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 RGS21Q2M5E4 152 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 TTC27Q6P3X3 843 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 CES3Q6UWW8 571 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 SCAIQ8N9R8 606 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 FBXO30Q8TB52 745 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 XPNPEP3Q9NQH7 507 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 SNTG2Q9NY99 539 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 NDST1P52848 882 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 LGALS3BPQ08380 585 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 INTS11Q5TA45 600 aaKnown RBP15.11■□□□□ 0.01
LMX1B-201ENST00000355497 LIN54Q6MZP7 749 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 CAMK1DQ8IU85 385 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 NEK6Q9HC98 313 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 SPG21Q9NZD8 308 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 TMCO1Q9UM00 188 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 SCAF8Q9UPN6 1271 aaKnown RBP15.11■□□□□ 0.01
LMX1B-201ENST00000355497 ALDH2P05091 517 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 HOXB8P17481 243 aaPredicted RBP15.11■□□□□ 0.01
LMX1B-201ENST00000355497 PKNOX1P55347 436 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 ACSM2AQ08AH3 577 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 ACSM2BQ68CK6 577 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 AGMOQ6ZNB7 445 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 CHPFQ8IZ52 775 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 TATDN2Q93075 761 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 MYLPFQ96A32 169 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 AHCYL2Q96HN2 611 aaKnown RBP15.11■□□□□ 0.01
LMX1B-201ENST00000355497 FDXACB1Q9BRP7 624 aaPredicted RBP15.11■□□□□ 0.01
LMX1B-201ENST00000355497 FAM126AQ9BYI3 521 aaPredicted RBP15.11■□□□□ 0.01
LMX1B-201ENST00000355497 COG5Q9UP83 839 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 DGKAP23743 735 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 MRPS22P82650 360 aaKnown RBP15.11■□□□□ 0.01
LMX1B-201ENST00000355497 RBBP4Q09028 425 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 OVOS1Q6IE37 1185 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 DOK6Q6PKX4 331 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 MAGEC3Q8TD91 643 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 MROH8Q9H579 483 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 CATSPERZQ9NTU4 200 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 FBXO10Q9UK96 956 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 PCDHB12Q9Y5F1 795 aa15.11■□□□□ 0.01
LMX1B-201ENST00000355497 TNPO3Q9Y5L0 923 aaKnown RBP15.11■□□□□ 0.01
LMX1B-201ENST00000355497 BTN3A3O00478 584 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 TTKP33981 857 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 OR7A2PQ8NGA2 310 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 PYDC1Q8WXC3 89 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 MYDGFQ969H8 173 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 Q96MT0 163 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 RSPH9Q9H1X1 276 aaPredicted RBP15.1■□□□□ 0.01
LMX1B-201ENST00000355497 SEMA4BQ9NPR2 832 aaPredicted RBP15.1■□□□□ 0.01
LMX1B-201ENST00000355497 VPS45Q9NRW7 570 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 CAP2P40123 477 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 RAB27AP51159 221 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 BCL2L1Q07817 233 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 NRF1Q16656 503 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 BROXQ5VW32 411 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 NEK5Q6P3R8 708 aa15.1■□□□□ 0.01
LMX1B-201ENST00000355497 RBM43Q6ZSC3 357 aaKnown RBP15.1■□□□□ 0.01
LMX1B-201ENST00000355497 ARMC8Q8IUR7 673 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms