RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 NEMP2A6NFY4 417 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 CDRT15L2A8MXV6 281 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 SLC31A1O15431 190 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 NEBLO76041 1014 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 FAM87AP0C7U9 286 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 ITGB6P18564 788 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 NUMBP49757 651 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 SETMARQ53H47 684 aaPredicted RBP16.38■□□□□ 0.21
DDX55-202ENST00000354291 ZNF542PQ5EBM4 170 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 FSCBQ5H9T9 825 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 CEP135Q66GS9 1140 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 XKR5Q6UX68 686 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 KRBA2Q6ZNG9 492 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 PTPRN2Q92932 1015 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 CCDC34Q96HJ3 373 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 IPO9Q96P70 1041 aaKnown RBP16.38■□□□□ 0.21
DDX55-202ENST00000354291 CALN1Q9BXU9 219 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 KDM4CQ9H3R0 1056 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 LRRC4Q9HBW1 653 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 NLGN3Q9NZ94 848 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 PCDHGA8Q9Y5G5 932 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 ENTPD2Q9Y5L3 495 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 U3KQA8 63 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 BSNQ9UPA5 3926 aa16.38■□□□□ 0.21
DDX55-202ENST00000354291 K7ESM1 405 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 TULP2O00295 520 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 MAPK13O15264 365 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 IRAK2O43187 625 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 ACSL4O60488 711 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 ZNF202O95125 648 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 MOCS3O95396 460 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 VAV1P15498 845 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 PRLRP16471 622 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 RPS24P62847 133 aaKnown RBP16.37■□□□□ 0.21
DDX55-202ENST00000354291 DPYDQ12882 1025 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 CDH18Q13634 790 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 CDKN3Q16667 212 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 FAM133BQ5BKY9 247 aaKnown RBP16.37■□□□□ 0.21
DDX55-202ENST00000354291 CRTC1Q6UUV9 634 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 BHLHA9Q7RTU4 235 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 TRIM69Q86WT6 500 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 UNC45BQ8IWX7 931 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 CFAP52Q8N1V2 620 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 HJURPQ8NCD3 748 aaPredicted RBP16.37■□□□□ 0.21
DDX55-202ENST00000354291 GRAMD1AQ96CP6 724 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 SGF29Q96ES7 293 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 DOCK9Q9BZ29 2069 aa16.37■□□□□ 0.21
DDX55-202ENST00000354291 NBASA2RRP1 2371 aa16.36■□□□□ 0.21
DDX55-202ENST00000354291 UTP20O75691 2785 aaKnown RBP16.36■□□□□ 0.21
DDX55-202ENST00000354291 RELNP78509 3460 aa16.36■□□□□ 0.21
DDX55-202ENST00000354291 TYW5A2RUC4 315 aaKnown RBP16.36■□□□□ 0.21
DDX55-202ENST00000354291 YJEFN3A6XGL0 299 aa16.36■□□□□ 0.21
DDX55-202ENST00000354291 E7ENQ6 273 aa16.36■□□□□ 0.21
DDX55-202ENST00000354291 SCAMP1O15126 338 aa16.36■□□□□ 0.21
DDX55-202ENST00000354291 PLRG1O43660 514 aaKnown RBP16.36■□□□□ 0.21
DDX55-202ENST00000354291 RPL13P26373 211 aaKnown RBP16.36■□□□□ 0.21
DDX55-202ENST00000354291 NNMTP40261 264 aa16.36■□□□□ 0.21
DDX55-202ENST00000354291 STK19P49842 368 aaPredicted RBP16.36■□□□□ 0.21
DDX55-202ENST00000354291 INHBCP55103 352 aa16.36■□□□□ 0.21
DDX55-202ENST00000354291 TLE1Q04724 770 aa16.36■□□□□ 0.21
DDX55-202ENST00000354291 ELAVL3Q14576 367 aaKnown RBP16.36■□□□□ 0.21
DDX55-202ENST00000354291 NFIL3Q16649 462 aa16.36■□□□□ 0.21
DDX55-202ENST00000354291 C4orf17Q53FE4 359 aa16.36■□□□□ 0.21
DDX55-202ENST00000354291 RBM44Q6ZP01 1051 aaKnown RBP16.36■□□□□ 0.21
DDX55-202ENST00000354291 EFL1Q7Z2Z2 1120 aaKnown RBP16.36■□□□□ 0.21
DDX55-202ENST00000354291 APCDD1Q8J025 514 aa16.36■□□□□ 0.21
DDX55-202ENST00000354291 GUF1Q8N442 669 aaKnown RBP16.36■□□□□ 0.21
DDX55-202ENST00000354291 ANKRD52Q8NB46 1076 aa16.36■□□□□ 0.21
DDX55-202ENST00000354291 WDR36Q8NI36 951 aaKnown RBP16.36■□□□□ 0.21
DDX55-202ENST00000354291 MYEOVQ96EZ4 313 aa16.36■□□□□ 0.21
DDX55-202ENST00000354291 DUSP23Q9BVJ7 150 aa16.36■□□□□ 0.21
DDX55-202ENST00000354291 NIF3L1Q9GZT8 377 aa16.36■□□□□ 0.21
DDX55-202ENST00000354291 USP29Q9HBJ7 922 aa16.36■□□□□ 0.21
DDX55-202ENST00000354291 ABCC13Q9NSE7 274 aa16.36■□□□□ 0.21
DDX55-202ENST00000354291 DNAJC28Q9NX36 388 aa16.36■□□□□ 0.21
DDX55-202ENST00000354291 TJP2Q9UDY2 1190 aa16.36■□□□□ 0.21
DDX55-202ENST00000354291 ATXN7L1Q9ULK2 861 aaPredicted RBP16.36■□□□□ 0.21
DDX55-202ENST00000354291 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.35■□□□□ 0.21
DDX55-202ENST00000354291 SLC7A4O43246 635 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 RNGTTO60942 597 aaKnown RBP16.35■□□□□ 0.21
DDX55-202ENST00000354291 PRR29P0C7W0 189 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 SFTPCP11686 197 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 NR2F2P24468 414 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 GCLMP48507 274 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 VAMP7P51809 220 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 ENPEPQ07075 957 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 ADIGQ0VDE8 80 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 CNTN1Q12860 1018 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 ZNF177Q13360 481 aaPredicted RBP16.35■□□□□ 0.21
DDX55-202ENST00000354291 C1orf220Q5T0J3 134 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 NADSYN1Q6IA69 706 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 GUSBP11Q6P575 273 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 INTS8Q75QN2 995 aaKnown RBP16.35■□□□□ 0.21
DDX55-202ENST00000354291 SLC4A11Q8NBS3 891 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 OR13H1Q8NG92 308 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 TAS1R2Q8TE23 839 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 TATDN2Q93075 761 aa16.35■□□□□ 0.21
DDX55-202ENST00000354291 PRICKLE1Q96MT3 831 aaPredicted RBP16.35■□□□□ 0.21
DDX55-202ENST00000354291 DDX50Q9BQ39 737 aaKnown RBP16.35■□□□□ 0.21
DDX55-202ENST00000354291 IRX2Q9BZI1 471 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms