RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 GOLGA8SH3BPF8 625 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 MID1O15344 667 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 SLC7A4O43246 635 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 RNASEH2AO75792 299 aaKnown RBP12.78□□□□□ -0.36
SGCA-202ENST00000344627 UCHL3P15374 230 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 CYP11B1P15538 503 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 C5AR1P21730 350 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 EEF1GP26641 437 aaKnown RBP12.78□□□□□ -0.36
SGCA-202ENST00000344627 MZF1P28698 734 aaPredicted RBP12.78□□□□□ -0.36
SGCA-202ENST00000344627 SLC8A1P32418 973 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 PSMD8P48556 350 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 CENPCQ03188 943 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 CCDC15Q0P6D6 951 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 OVGP1Q12889 678 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 CST6Q15828 149 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 CT47A1Q5JQC4 288 aaPredicted RBP12.78□□□□□ -0.36
SGCA-202ENST00000344627 C9orf64Q5T6V5 341 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 ACBD5Q5T8D3 534 aaPredicted RBP12.78□□□□□ -0.36
SGCA-202ENST00000344627 FAM102AQ5T9C2 384 aaPredicted RBP12.78□□□□□ -0.36
SGCA-202ENST00000344627 FBXL22Q6P050 247 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 SASS6Q6UVJ0 657 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 SLC26A9Q7LBE3 791 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 DSG4Q86SJ6 1040 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 ZDHHC17Q8IUH5 632 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 CACTIN-AS1Q8N1I8 211 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 STK40Q8N2I9 435 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 PNPLA1Q8N8W4 532 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 MSANTD4Q8NCY6 345 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 CPA5Q8WXQ8 436 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 MYO19Q96H55 970 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 ELF4Q99607 663 aaPredicted RBP12.78□□□□□ -0.36
SGCA-202ENST00000344627 PRMT1Q99873 361 aaKnown RBP12.78□□□□□ -0.36
SGCA-202ENST00000344627 WDCPQ9H6R7 721 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 ERVMER34-1Q9H9K5 563 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 IL21RQ9HBE5 538 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 TOR4AQ9NXH8 423 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 RRN3Q9NYV6 651 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 FTSJ1Q9UET6 329 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 SLC25A13Q9UJS0 675 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 STAP1Q9ULZ2 295 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 HS3ST4Q9Y661 456 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 SPEGQ15772 3267 aa12.78□□□□□ -0.36
SGCA-202ENST00000344627 GOLGA6L22H0YM25 854 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 BNIP3LO60238 219 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 PAGE1O75459 146 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 IL1BP01584 269 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 ZNF18P17022 549 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 GOT1P17174 413 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 HNF1BP35680 557 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 ARRB1P49407 418 aaPredicted RBP12.77□□□□□ -0.37
SGCA-202ENST00000344627 GALCP54803 685 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 DEUP1Q05D60 604 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 ILKQ13418 452 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 EIF4EBP2Q13542 120 aaPredicted RBP12.77□□□□□ -0.37
SGCA-202ENST00000344627 ELAVL3Q14576 367 aaKnown RBP12.77□□□□□ -0.37
SGCA-202ENST00000344627 C2CD6Q53TS8 623 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 FKBP15Q5T1M5 1219 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 FAM46CQ5VWP2 391 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 NAA35Q5VZE5 725 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 C14orf80Q86SX3 495 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 IQCHQ86VS3 1027 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 ENOX1Q8TC92 643 aaKnown RBP12.77□□□□□ -0.37
SGCA-202ENST00000344627 STK33Q9BYT3 514 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 TKTL2Q9H0I9 626 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 MUC3BQ9H195 1237 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 NEUROG2Q9H2A3 272 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 GDF3Q9NR23 364 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 VPS28Q9UK41 221 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 DMTF1Q9Y222 760 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 SNX10Q9Y5X0 201 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 ZZEF1O43149 2961 aa12.77□□□□□ -0.37
SGCA-202ENST00000344627 C10orf142B7Z368 130 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 GFPT2O94808 682 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 ADCY5O95622 1261 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 F9P00740 461 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 IGHV4-34P06331 123 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 MMEP08473 750 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 VAV1P15498 845 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 TFE3P19532 575 aaPredicted RBP12.76□□□□□ -0.37
SGCA-202ENST00000344627 CDK11BP21127 795 aaKnown RBP12.76□□□□□ -0.37
SGCA-202ENST00000344627 CD38P28907 300 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 PLK1P53350 603 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 POLR2FP61218 127 aaKnown RBP12.76□□□□□ -0.37
SGCA-202ENST00000344627 KRT31Q15323 416 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 DPY19L2P1Q6NXN4 242 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 NCEH1Q6PIU2 408 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 LRRC31Q6UY01 552 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 PHLDB2Q86SQ0 1253 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 NOP9Q86U38 636 aaKnown RBP12.76□□□□□ -0.37
SGCA-202ENST00000344627 XYLT1Q86Y38 959 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 ANKRD20A12PQ8NF67 263 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 ZNF397Q8NF99 534 aaPredicted RBP12.76□□□□□ -0.37
SGCA-202ENST00000344627 OR14C36Q8NHC7 312 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 GPT2Q8TD30 523 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 SPAG5Q96R06 1193 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 FAM129BQ96TA1 746 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 TBCBQ99426 244 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 ORAI3Q9BRQ5 295 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 NLRC4Q9NPP4 1024 aa12.76□□□□□ -0.37
SGCA-202ENST00000344627 FAM207AQ9NSI2 230 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms