RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 RAB6BQ9NRW1 208 aa18.87■□□□□ 0.61
SMPD1-201ENST00000342245 C20orf96Q9NUD7 363 aaPredicted RBP18.87■□□□□ 0.61
SMPD1-201ENST00000342245 GDAP2Q9NXN4 497 aa18.87■□□□□ 0.61
SMPD1-201ENST00000342245 COL5A3P25940 1745 aaPredicted RBP18.87■□□□□ 0.61
SMPD1-201ENST00000342245 FAM172BPA6NC97 362 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 LRRIQ4A6NIV6 560 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 TBKBP1A7MCY6 615 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 SLCO1B7G3V0H7 640 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 GUCY1B2O75343 617 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 DPP6P42658 865 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 MPP1Q00013 466 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 PLEKHG7Q6ZR37 379 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 AKAP14Q86UN6 197 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 DCP2Q8IU60 420 aaKnown RBP18.86■□□□□ 0.61
SMPD1-201ENST00000342245 UNC5BQ8IZJ1 945 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 TDRD5Q8NAT2 981 aaKnown RBP18.86■□□□□ 0.61
SMPD1-201ENST00000342245 ABHD11Q8NFV4 315 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 CYP2W1Q8TAV3 490 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 SPATA18Q8TC71 538 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 PPWD1Q96BP3 646 aaKnown RBP18.86■□□□□ 0.61
SMPD1-201ENST00000342245 ACSF2Q96CM8 615 aaPredicted RBP18.86■□□□□ 0.61
SMPD1-201ENST00000342245 GPR101Q96P66 508 aaPredicted RBP18.86■□□□□ 0.61
SMPD1-201ENST00000342245 OR52B2Q96RD2 323 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 EBNA1BP2Q99848 306 aaKnown RBP18.86■□□□□ 0.61
SMPD1-201ENST00000342245 NAA50Q9GZZ1 169 aaKnown RBP18.86■□□□□ 0.61
SMPD1-201ENST00000342245 UPF3AQ9H1J1 476 aaKnown RBP18.86■□□□□ 0.61
SMPD1-201ENST00000342245 PLAC1Q9HBJ0 212 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 CPNE5Q9HCH3 593 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 ADA2Q9NZK5 511 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 CNOT6Q9ULM6 557 aaKnown RBP18.86■□□□□ 0.61
SMPD1-201ENST00000342245 CNTNAP2Q9UHC6 1331 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 ENTPD3O75355 529 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 DEAF1O75398 565 aaPredicted RBP18.86■□□□□ 0.61
SMPD1-201ENST00000342245 UFL1O94874 794 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 FGFR3P22607 806 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 IDUAP35475 653 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 TUBA1BP68363 451 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 CDC20Q12834 499 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 SLC10A2Q12908 348 aaPredicted RBP18.86■□□□□ 0.61
SMPD1-201ENST00000342245 TRIM71Q2Q1W2 868 aaKnown RBP18.86■□□□□ 0.61
SMPD1-201ENST00000342245 BTBD8Q5XKL5 378 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 TUBA1AQ71U36 451 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 FBXO11Q86XK2 927 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 RNF148Q8N7C7 305 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 ZNF781Q8N8C0 355 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 ZSCAN18Q8TBC5 510 aaPredicted RBP18.86■□□□□ 0.61
SMPD1-201ENST00000342245 CDKL2Q92772 493 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 C9orf16Q9BUW7 83 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 ILKAPQ9H0C8 392 aaPredicted RBP18.86■□□□□ 0.61
SMPD1-201ENST00000342245 UNC93B1Q9H1C4 597 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 ZBTB26Q9HCK0 441 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 VTI1BQ9UEU0 232 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 CNTN6Q9UQ52 1028 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 PCDHB4Q9Y5E5 795 aa18.86■□□□□ 0.61
SMPD1-201ENST00000342245 RNF103O00237 685 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 HDAC3O15379 428 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 ACO1P21399 889 aaKnown RBP18.85■□□□□ 0.61
SMPD1-201ENST00000342245 OPRL1P41146 370 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 LEPRP48357 1165 aaKnown RBP18.85■□□□□ 0.61
SMPD1-201ENST00000342245 SLC25A11Q02978 314 aaKnown RBP18.85■□□□□ 0.61
SMPD1-201ENST00000342245 MAPRE1Q15691 268 aaKnown RBP18.85■□□□□ 0.61
SMPD1-201ENST00000342245 HMBOX1Q6NT76 420 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 ERMP1Q7Z2K6 904 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 CAND1Q86VP6 1230 aaKnown RBP18.85■□□□□ 0.61
SMPD1-201ENST00000342245 ZFPM1Q8IX07 1006 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 POMGNT1Q8WZA1 660 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 SLCO4A1Q96BD0 722 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 VMP1Q96GC9 406 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 PI4K2AQ9BTU6 479 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 ZNF518BQ9C0D4 1074 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 VPS33BQ9H267 617 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 CNGB3Q9NQW8 809 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 TOPORSQ9NS56 1045 aaPredicted RBP18.85■□□□□ 0.61
SMPD1-201ENST00000342245 CROCCQ5TZA2 2017 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 HEATR9A2RTY3 570 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 SOCS2O14508 198 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 KRT3P12035 628 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 SERPINB1P30740 379 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 ARRB2P32121 409 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 RHBDL3P58872 404 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 CHRNEQ04844 493 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 FSTL1Q12841 308 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 WDR45BQ5MNZ6 344 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 SLC9A4Q6AI14 798 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 ATG14Q6ZNE5 492 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 C15orf39Q6ZRI6 1047 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 AMIGO3Q86WK7 504 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 PARP8Q8N3A8 854 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 CAPSLQ8WWF8 208 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 RTP4Q96DX8 246 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 RSAD1Q9HA92 442 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 AKIP1Q9NQ31 210 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 WRAP73Q9P2S5 460 aaPredicted RBP18.85■□□□□ 0.61
SMPD1-201ENST00000342245 N6AMT1Q9Y5N5 214 aa18.85■□□□□ 0.61
SMPD1-201ENST00000342245 LOC105371267A0A1B0GV96 52 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 PSMD11O00231 422 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 TPP1O14773 563 aa18.84■□□□□ 0.61
SMPD1-201ENST00000342245 TOP3BO95985 862 aaKnown RBP18.84■□□□□ 0.61
SMPD1-201ENST00000342245 MBL2P11226 248 aaPredicted RBP18.84■□□□□ 0.61
SMPD1-201ENST00000342245 ACADSBP45954 432 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms