RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 C6orf203Q9P0P8 240 aaPredicted RBP13.06□□□□□ -0.32
LIN54-201ENST00000340417 PSMC3IPQ9P2W1 217 aaPredicted RBP13.06□□□□□ -0.32
LIN54-201ENST00000340417 INPP4BO15327 924 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 AIF1P55008 147 aa13.06□□□□□ -0.32
LIN54-201ENST00000340417 POU5F1Q01860 360 aaKnown RBP13.06□□□□□ -0.32
LIN54-201ENST00000340417 RSRC1Q96IZ7 334 aaKnown RBP13.06□□□□□ -0.32
LIN54-201ENST00000340417 GPN3Q9UHW5 284 aaPredicted RBP13.06□□□□□ -0.32
LIN54-201ENST00000340417 FAM47E-STBD1D6RA91 191 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 RASGRP1O95267 797 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 ASLP04424 464 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 HNRNPA1P09651 372 aaKnown RBP eCLIP13.05□□□□□ -0.32
LIN54-201ENST00000340417 STMN1P16949 149 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 CDH4P55283 916 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 MFSD7Q6UXD7 560 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 ZNF280BQ86YH2 543 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 ELMO1Q92556 727 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 PKNOX2Q96KN3 472 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 PRPF18Q99633 342 aaKnown RBP13.05□□□□□ -0.32
LIN54-201ENST00000340417 LHX5Q9H2C1 402 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 FAM124BQ9H5Z6 455 aaPredicted RBP13.05□□□□□ -0.32
LIN54-201ENST00000340417 PPARGC1AQ9UBK2 798 aaKnown RBP13.05□□□□□ -0.32
LIN54-201ENST00000340417 PCCBP05166 539 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 KDELR1P24390 212 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 RFX3P48380 749 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 NPY2RP49146 381 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 WDR5P61964 334 aaKnown RBP13.05□□□□□ -0.32
LIN54-201ENST00000340417 KLHL35Q6PF15 583 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 RRM2BQ7LG56 351 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 KIRREL3Q8IZU9 778 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 ZNF655Q8N720 491 aaPredicted RBP13.05□□□□□ -0.32
LIN54-201ENST00000340417 ZSWIM2Q8NEG5 633 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 HLA-CQ95604 372 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 PPP1R36Q96LQ0 422 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 CDCA3Q99618 268 aaPredicted RBP13.05□□□□□ -0.32
LIN54-201ENST00000340417 ABCB8Q9NUT2 735 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 GNEQ9Y223 722 aaKnown RBP13.05□□□□□ -0.32
LIN54-201ENST00000340417 SYCE1LA8MT33 242 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 TXNDC9O14530 226 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 ATP4AP20648 1035 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 MAT2AP31153 395 aaKnown RBP13.05□□□□□ -0.32
LIN54-201ENST00000340417 KRT20P35900 424 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 BTKQ06187 659 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 ITPRIPL2Q3MIP1 535 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 TRMT10CQ7L0Y3 403 aaKnown RBP13.05□□□□□ -0.32
LIN54-201ENST00000340417 HES6Q96HZ4 224 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 FGFBP2Q9BYJ0 223 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 BPIFA1Q9NP55 256 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 CTNNAL1Q9UBT7 734 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 ADAMTS5Q9UNA0 930 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 USP27XA6NNY8 438 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 HMGB1P1B2RPK0 211 aaPredicted RBP13.05□□□□□ -0.32
LIN54-201ENST00000340417 GOT1P17174 413 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 MAGEA10P43363 369 aaPredicted RBP13.05□□□□□ -0.32
LIN54-201ENST00000340417 RAD23BP54727 409 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 NOMO3P69849 1222 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 SPIRE1Q08AE8 756 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 EFTUD2Q15029 972 aaKnown RBP eCLIP13.05□□□□□ -0.32
LIN54-201ENST00000340417 PHF13Q86YI8 300 aaPredicted RBP13.05□□□□□ -0.32
LIN54-201ENST00000340417 PDCD7Q8N8D1 485 aaKnown RBP13.05□□□□□ -0.32
LIN54-201ENST00000340417 MYO19Q96H55 970 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 LRRC1Q9BTT6 524 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 TNKS2Q9H2K2 1166 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 TIMM44O43615 452 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 CCNG2Q16589 344 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 TAF8Q7Z7C8 310 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 PCYT2Q99447 389 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 R3HDMLQ9H3Y0 253 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 AGO3Q9H9G7 860 aaKnown RBP13.05□□□□□ -0.32
LIN54-201ENST00000340417 MLXIPLQ9NP71 852 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 COMMD8Q9NX08 183 aa13.05□□□□□ -0.32
LIN54-201ENST00000340417 E9PAM4 449 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 SLC25A14O95258 325 aaPredicted RBP13.04□□□□□ -0.32
LIN54-201ENST00000340417 KCNE1P15382 129 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 MAXP61244 160 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 PARP15Q460N3 678 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 PHYKPLQ8IUZ5 450 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 THOC1Q96FV9 657 aaKnown RBP13.04□□□□□ -0.32
LIN54-201ENST00000340417 RHOBTB2Q9BYZ6 727 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 PITPNM3Q9BZ71 974 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 TRABDQ9H4I3 376 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.04□□□□□ -0.32
LIN54-201ENST00000340417 SLC31A1O15431 190 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 RRP9O43818 475 aaKnown RBP13.04□□□□□ -0.32
LIN54-201ENST00000340417 BAG2O95816 211 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 GUCA1CO95843 209 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 ERCC2P18074 760 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 CCDC197Q8NCU1 140 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 OR10G6Q8NH81 332 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 SIPA1Q96FS4 1042 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 WDR24Q96S15 920 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 EVLQ9UI08 416 aaPredicted RBP13.04□□□□□ -0.32
LIN54-201ENST00000340417 SLC27A6Q9Y2P4 619 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 WNT6Q9Y6F9 365 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 GSAPA4D1B5 854 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 MAN2B1O00754 1011 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 STRA8Q7Z7C7 330 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 TDHQ8IZJ6 230 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 STK40Q8N2I9 435 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 COG1Q8WTW3 980 aa13.04□□□□□ -0.32
LIN54-201ENST00000340417 ZNF576Q9H609 170 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms