RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 CCNCP24863 283 aa8.02□□□□□ -1.13
TMC1-202ENST00000340019 PRPF38BQ5VTL8 546 aaKnown RBP8.02□□□□□ -1.13
TMC1-202ENST00000340019 CXorf57Q6NSI4 855 aaKnown RBP8.02□□□□□ -1.13
TMC1-202ENST00000340019 CES5AQ6NT32 575 aa8.02□□□□□ -1.13
TMC1-202ENST00000340019 SETD3Q86TU7 594 aaPredicted RBP8.02□□□□□ -1.13
TMC1-202ENST00000340019 CCDC13Q8IYE1 715 aa8.02□□□□□ -1.13
TMC1-202ENST00000340019 TDRD5Q8NAT2 981 aaKnown RBP8.02□□□□□ -1.13
TMC1-202ENST00000340019 TTC16Q8NEE8 873 aa8.02□□□□□ -1.13
TMC1-202ENST00000340019 DEPDC1BQ8WUY9 529 aa8.02□□□□□ -1.13
TMC1-202ENST00000340019 SMARCD2Q92925 531 aa8.02□□□□□ -1.13
TMC1-202ENST00000340019 TMA16Q96EY4 203 aaKnown RBP8.02□□□□□ -1.13
TMC1-202ENST00000340019 HMCESQ96FZ2 354 aa8.02□□□□□ -1.13
TMC1-202ENST00000340019 SNF8Q96H20 258 aa8.02□□□□□ -1.13
TMC1-202ENST00000340019 NEUROG2Q9H2A3 272 aa8.02□□□□□ -1.13
TMC1-202ENST00000340019 MYO18AQ92614 2054 aaKnown RBP8.02□□□□□ -1.13
TMC1-202ENST00000340019 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.01□□□□□ -1.13
TMC1-202ENST00000340019 TBL1XO60907 577 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 PEX11BO96011 259 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 ITIH2P19823 946 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 FCARP24071 287 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 HOXD9P28356 352 aaPredicted RBP8.01□□□□□ -1.13
TMC1-202ENST00000340019 ADCY8P40145 1251 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 VPS41P49754 854 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 CLCN6P51797 869 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 GPS1Q13098 491 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 POLD3Q15054 466 aaPredicted RBP8.01□□□□□ -1.13
TMC1-202ENST00000340019 BRD3Q15059 726 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 MPPE1Q53F39 396 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 FAM182AQ5T1J6 154 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 C6orf118Q5T5N4 469 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 FYB2Q5VWT5 728 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 ATPAF2Q8N5M1 289 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 SMRP1Q8NCR6 262 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 IFT81Q8WYA0 676 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 ARHGEF2Q92974 986 aaKnown RBP8.01□□□□□ -1.13
TMC1-202ENST00000340019 ART4Q93070 314 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 ZNF419Q96HQ0 510 aaPredicted RBP8.01□□□□□ -1.13
TMC1-202ENST00000340019 TBC1D14Q9P2M4 693 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 CDH7Q9ULB5 785 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 NFU1Q9UMS0 254 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 PRUNE2Q8WUY3 3088 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 A0A0A0MRY4 1105 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.01□□□□□ -1.13
TMC1-202ENST00000340019 A0A0D9SEW6 157 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 ILVBLA1L0T0 632 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 ARHGAP42A6NI28 874 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 KCNK1O00180 336 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 RNF103O00237 685 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 MTSS1O43312 755 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 LUC7L3O95232 432 aaKnown RBP8.01□□□□□ -1.13
TMC1-202ENST00000340019 IGFBP4P22692 258 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 PTPN3P26045 913 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 ZNF177Q13360 481 aaPredicted RBP8.01□□□□□ -1.13
TMC1-202ENST00000340019 SERINC3Q13530 473 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 FSCBQ5H9T9 825 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 FBXO38Q6PIJ6 1188 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 RHBDF2Q6PJF5 856 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 ZNF783Q6ZMS7 281 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 GSPT2Q8IYD1 628 aaKnown RBP8.01□□□□□ -1.13
TMC1-202ENST00000340019 ADGRG2Q8IZP9 1017 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 CCDC110Q8TBZ0 833 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 AENQ8WTP8 325 aaKnown RBP8.01□□□□□ -1.13
TMC1-202ENST00000340019 HNRNPLLQ8WVV9 542 aaKnown RBP8.01□□□□□ -1.13
TMC1-202ENST00000340019 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.01□□□□□ -1.13
TMC1-202ENST00000340019 MAML1Q92585 1016 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 OTUB2Q96DC9 234 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 FAM161BQ96MY7 647 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 SPATA13Q96N96 652 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 FAM129AQ9BZQ8 928 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 MAGEH1Q9H213 219 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 LINC00597Q9H2U6 94 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 OBP2AQ9NY56 170 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 PAK5Q9P286 719 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 IPO11Q9UI26 975 aaKnown RBP8.01□□□□□ -1.13
TMC1-202ENST00000340019 FARP1Q9Y4F1 1045 aaPredicted RBP8.01□□□□□ -1.13
TMC1-202ENST00000340019 TYW5A2RUC4 315 aaKnown RBP8.01□□□□□ -1.13
TMC1-202ENST00000340019 DNALI1O14645 258 aaPredicted RBP8.01□□□□□ -1.13
TMC1-202ENST00000340019 MATN3O15232 486 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 ACVRL1P37023 503 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 VIPR2P41587 438 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 IFI35P80217 286 aaPredicted RBP8.01□□□□□ -1.13
TMC1-202ENST00000340019 GNA12Q03113 381 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 ZBTB17Q13105 803 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 ANKRD20A2Q5SQ80 823 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 ANKRD20A1Q5TYW2 823 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 ANKRD20A3Q5VUR7 823 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 TIGD7Q6NT04 549 aaPredicted RBP8.01□□□□□ -1.13
TMC1-202ENST00000340019 HIBCHQ6NVY1 386 aaPredicted RBP8.01□□□□□ -1.13
TMC1-202ENST00000340019 C4orf22Q6V702 233 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 ZNF567Q8N184 647 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 FBXO25Q8TCJ0 367 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 RIPOR3Q96MK2 946 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 MYADMQ96S97 322 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 VAT1Q99536 393 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 ACE2Q9BYF1 805 aaPredicted RBP8.01□□□□□ -1.13
TMC1-202ENST00000340019 PDFQ9HBH1 243 aa8.01□□□□□ -1.13
TMC1-202ENST00000340019 J3KR12 359 aa8□□□□□ -1.13
TMC1-202ENST00000340019 OPHN1O60890 802 aa8□□□□□ -1.13
TMC1-202ENST00000340019 PENKP01210 267 aaPredicted RBP8□□□□□ -1.13
TMC1-202ENST00000340019 TEX44Q53QW1 395 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms