RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 ZNF358Q9NW07 568 aa15.79■□□□□ 0.12
MBD1-203ENST00000339998 PRRC2BQ5JSZ5 2229 aaKnown RBP15.79■□□□□ 0.12
MBD1-203ENST00000339998 ARHGEF37A1IGU5 675 aa15.79■□□□□ 0.12
MBD1-203ENST00000339998 TRDMT1O14717 391 aaKnown RBP15.79■□□□□ 0.12
MBD1-203ENST00000339998 SYN3O14994 580 aa15.79■□□□□ 0.12
MBD1-203ENST00000339998 NEFHP12036 1026 aa15.79■□□□□ 0.12
MBD1-203ENST00000339998 CCL5P13501 91 aa15.79■□□□□ 0.12
MBD1-203ENST00000339998 ATF6P18850 670 aa15.79■□□□□ 0.12
MBD1-203ENST00000339998 MX2P20592 715 aa15.79■□□□□ 0.12
MBD1-203ENST00000339998 CHRNA4P43681 627 aa15.79■□□□□ 0.12
MBD1-203ENST00000339998 SCTRP47872 440 aa15.79■□□□□ 0.12
MBD1-203ENST00000339998 MLLT6P55198 1093 aaPredicted RBP15.79■□□□□ 0.12
MBD1-203ENST00000339998 HSP90AA5PQ58FG0 334 aa15.79■□□□□ 0.12
MBD1-203ENST00000339998 CMC1Q7Z7K0 106 aa15.79■□□□□ 0.12
MBD1-203ENST00000339998 CFAP52Q8N1V2 620 aa15.79■□□□□ 0.12
MBD1-203ENST00000339998 AUTS2Q8WXX7 1259 aa15.79■□□□□ 0.12
MBD1-203ENST00000339998 APOPT1Q96IL0 206 aa15.79■□□□□ 0.12
MBD1-203ENST00000339998 NPHS2Q9NP85 383 aa15.79■□□□□ 0.12
MBD1-203ENST00000339998 TRIM33Q9UPN9 1127 aa15.79■□□□□ 0.12
MBD1-203ENST00000339998 ACTL7AQ9Y615 435 aa15.79■□□□□ 0.12
MBD1-203ENST00000339998 NUMBLQ9Y6R0 609 aa15.79■□□□□ 0.12
MBD1-203ENST00000339998 SLC12A8A0AV02 714 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 KRT37O76014 449 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 OR1D2P34982 312 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 SLC18A2Q05940 514 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 PCSK7Q16549 785 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 MS4A13Q5J8X5 152 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 ZCCHC23Q6ZST2 131 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 SCML4Q8N228 414 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 C8orf48Q96LL4 319 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 HAPLN3Q96S86 360 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 PPCSQ9HAB8 311 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 PAK6Q9NQU5 681 aaPredicted RBP15.78■□□□□ 0.12
MBD1-203ENST00000339998 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.78■□□□□ 0.12
MBD1-203ENST00000339998 ZWINTO95229 277 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 HLA-DQB2P05538 268 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 NMBRP28336 390 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 MAGEA9P43362 315 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 POU6F1Q14863 301 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 FUBP3Q96I24 572 aaKnown RBP eCLIP15.78■□□□□ 0.12
MBD1-203ENST00000339998 BRD8Q9H0E9 1235 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 CAB39LQ9H9S4 337 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 EDF1O60869 148 aaKnown RBP15.78■□□□□ 0.12
MBD1-203ENST00000339998 GNRH1P01148 92 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 ALDOAP04075 364 aaKnown RBP15.78■□□□□ 0.12
MBD1-203ENST00000339998 PGAM1P18669 254 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 DLG2Q15700 870 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 BRMS1LQ5PSV4 323 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 RFWD3Q6PCD5 774 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 PACS1Q6VY07 963 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 RASSF3Q86WH2 238 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 SPATS2Q86XZ4 545 aaKnown RBP15.78■□□□□ 0.12
MBD1-203ENST00000339998 RFWD2Q8NHY2 731 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 VWCEQ96DN2 955 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 SLC39A13Q96H72 371 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 SERPINB11Q96P15 392 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.78■□□□□ 0.12
MBD1-203ENST00000339998 RBM22Q9NW64 420 aaKnown RBP eCLIP15.78■□□□□ 0.12
MBD1-203ENST00000339998 MARCH2Q9P0N8 246 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 PRKAG3Q9UGI9 489 aa15.78■□□□□ 0.12
MBD1-203ENST00000339998 H0YHG0 523 aa15.77■□□□□ 0.12
MBD1-203ENST00000339998 TPP1O14773 563 aa15.77■□□□□ 0.12
MBD1-203ENST00000339998 SUN1O94901 812 aa15.77■□□□□ 0.12
MBD1-203ENST00000339998 MLNP12872 115 aa15.77■□□□□ 0.12
MBD1-203ENST00000339998 CDK16Q00536 496 aa15.77■□□□□ 0.12
MBD1-203ENST00000339998 NIPAL4Q0D2K0 466 aa15.77■□□□□ 0.12
MBD1-203ENST00000339998 IHHQ14623 411 aa15.77■□□□□ 0.12
MBD1-203ENST00000339998 ITIH4Q14624 930 aa15.77■□□□□ 0.12
MBD1-203ENST00000339998 STEAP4Q687X5 459 aa15.77■□□□□ 0.12
MBD1-203ENST00000339998 FBXL22Q6P050 247 aa15.77■□□□□ 0.12
MBD1-203ENST00000339998 YTHDF3Q7Z739 585 aaKnown RBP15.77■□□□□ 0.12
MBD1-203ENST00000339998 PACS2Q86VP3 889 aa15.77■□□□□ 0.12
MBD1-203ENST00000339998 ZNF784Q8NCA9 323 aaPredicted RBP15.77■□□□□ 0.12
MBD1-203ENST00000339998 FBXO22Q8NEZ5 403 aa15.77■□□□□ 0.12
MBD1-203ENST00000339998 PABPC5Q96DU9 382 aaKnown RBP15.77■□□□□ 0.12
MBD1-203ENST00000339998 HMCESQ96FZ2 354 aa15.77■□□□□ 0.12
MBD1-203ENST00000339998 TTPALQ9BTX7 342 aa15.77■□□□□ 0.12
MBD1-203ENST00000339998 MANSC1Q9H8J5 431 aa15.77■□□□□ 0.12
MBD1-203ENST00000339998 EIF2B3Q9NR50 452 aaKnown RBP15.77■□□□□ 0.12
MBD1-203ENST00000339998 ZFATQ9P243 1243 aa15.77■□□□□ 0.12
MBD1-203ENST00000339998 ATP11BQ9Y2G3 1177 aa15.77■□□□□ 0.12
MBD1-203ENST00000339998 NCAM2O15394 837 aa15.77■□□□□ 0.11
MBD1-203ENST00000339998 ETFBP38117 255 aa15.77■□□□□ 0.11
MBD1-203ENST00000339998 MNX1P50219 401 aaPredicted RBP15.77■□□□□ 0.11
MBD1-203ENST00000339998 ACTN3Q08043 901 aaPredicted RBP15.77■□□□□ 0.11
MBD1-203ENST00000339998 GPR17Q13304 367 aa15.77■□□□□ 0.11
MBD1-203ENST00000339998 CERS2Q96G23 380 aa15.77■□□□□ 0.11
MBD1-203ENST00000339998 IQCGQ9H095 443 aaKnown RBP15.77■□□□□ 0.11
MBD1-203ENST00000339998 FBXO44Q9H4M3 255 aa15.77■□□□□ 0.11
MBD1-203ENST00000339998 ACSS2Q9NR19 701 aa15.77■□□□□ 0.11
MBD1-203ENST00000339998 HAUS2Q9NVX0 235 aa15.77■□□□□ 0.11
MBD1-203ENST00000339998 GGA2Q9UJY4 613 aa15.77■□□□□ 0.11
MBD1-203ENST00000339998 FNDC1Q4ZHG4 1894 aaPredicted RBP15.77■□□□□ 0.11
MBD1-203ENST00000339998 COL4A4P53420 1690 aaPredicted RBP15.76■□□□□ 0.11
MBD1-203ENST00000339998 ZCWPW2A0A1B0GU75 182 aa15.76■□□□□ 0.11
MBD1-203ENST00000339998 ALDH1A2O94788 518 aa15.76■□□□□ 0.11
MBD1-203ENST00000339998 GJB5O95377 273 aa15.76■□□□□ 0.11
MBD1-203ENST00000339998 SAT1P21673 171 aa15.76■□□□□ 0.11
MBD1-203ENST00000339998 SERPINB4P48594 390 aa15.76■□□□□ 0.11
MBD1-203ENST00000339998 ELAC1Q9H777 363 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms