RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 MED24O75448 989 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 RNASEH2AO75792 299 aaKnown RBP5.72□□□□□ -1.49
CSDE1-202ENST00000339438 RALAP11233 206 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 TNFAIP3P21580 790 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 ADCY7P51828 1080 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 STAT2P52630 851 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 PSMC6P62333 389 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 WASHC5Q12768 1159 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 SLC10A2Q12908 348 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-202ENST00000339438 PIGGQ5H8A4 983 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 DRICH1Q6PGQ1 229 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-202ENST00000339438 PLEKHH3Q7Z736 793 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 SETD3Q86TU7 594 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-202ENST00000339438 OSTM1Q86WC4 334 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 GRAMD2AQ8IUY3 354 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 IGDCC3Q8IVU1 814 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 BBOF1Q8ND07 529 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 MED30Q96HR3 178 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 ZMAT2Q96NC0 199 aaKnown RBP5.72□□□□□ -1.49
CSDE1-202ENST00000339438 INTS2Q9H0H0 1204 aaKnown RBP5.72□□□□□ -1.49
CSDE1-202ENST00000339438 PDGFCQ9NRA1 345 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 VPS28Q9UK41 221 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 PCDHGA8Q9Y5G5 932 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 CHMP2AO43633 222 aa5.71□□□□□ -1.49
CSDE1-202ENST00000339438 LIASO43766 372 aa5.71□□□□□ -1.49
CSDE1-202ENST00000339438 NAT2P11245 290 aa5.71□□□□□ -1.49
CSDE1-202ENST00000339438 NELFEP18615 380 aaKnown RBP5.71□□□□□ -1.49
CSDE1-202ENST00000339438 MXI1P50539 228 aa5.71□□□□□ -1.49
CSDE1-202ENST00000339438 EPHB1P54762 984 aa5.71□□□□□ -1.49
CSDE1-202ENST00000339438 GRSF1Q12849 480 aaKnown RBP eCLIP5.71□□□□□ -1.496e-6■■□□□ 12.3
CSDE1-202ENST00000339438 RGS21Q2M5E4 152 aa5.71□□□□□ -1.49
CSDE1-202ENST00000339438 LRIT3Q3SXY7 679 aa5.71□□□□□ -1.49
CSDE1-202ENST00000339438 POTEGQ6S5H5 508 aa5.71□□□□□ -1.49
CSDE1-202ENST00000339438 CD300LGQ6UXG3 332 aa5.71□□□□□ -1.49
CSDE1-202ENST00000339438 GADL1Q6ZQY3 521 aa5.71□□□□□ -1.49
CSDE1-202ENST00000339438 LIMS2Q7Z4I7 341 aa5.71□□□□□ -1.49
CSDE1-202ENST00000339438 CCDC124Q96CT7 223 aaKnown RBP5.71□□□□□ -1.49
CSDE1-202ENST00000339438 TMA16Q96EY4 203 aaKnown RBP5.71□□□□□ -1.49
CSDE1-202ENST00000339438 HERC2P3Q9BVR0 1158 aa5.71□□□□□ -1.49
CSDE1-202ENST00000339438 WWP1Q9H0M0 922 aa5.71□□□□□ -1.49
CSDE1-202ENST00000339438 THG1LQ9NWX6 298 aaKnown RBP5.71□□□□□ -1.49
CSDE1-202ENST00000339438 KLQ9UEF7 1012 aa5.71□□□□□ -1.49
CSDE1-202ENST00000339438 STK39Q9UEW8 545 aa5.71□□□□□ -1.49
CSDE1-202ENST00000339438 PRELID1Q9Y255 219 aa5.71□□□□□ -1.49
CSDE1-202ENST00000339438 PLLPQ9Y342 182 aa5.71□□□□□ -1.49
CSDE1-202ENST00000339438 LRP4O75096 1905 aa5.71□□□□□ -1.49
CSDE1-202ENST00000339438 RFPL1O75677 317 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 PARNO95453 639 aaKnown RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 PRKCGP05129 697 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 NCAM1P13591 858 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 CCDC130P13994 396 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 PRKCAP17252 672 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 DSC3Q14574 896 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 MORF4L2Q15014 288 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 PUS10Q3MIT2 529 aaKnown RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 WDR45BQ5MNZ6 344 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 ANKRD22Q5VYY1 191 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 LMBRD2Q68DH5 695 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 ABHD15Q6UXT9 468 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 DSG4Q86SJ6 1040 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 FBXO11Q86XK2 927 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 CLVS1Q8IUQ0 354 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 DEFB107AQ8IZN7 70 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 PHTF2Q8N3S3 785 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 HIPK4Q8NE63 616 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 SLCO4A1Q96BD0 722 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 REEP2Q9BRK0 252 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 TINF2Q9BSI4 451 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 GCOM2Q9BZD3 368 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.71□□□□□ -1.59e-6■■□□□ 13.2
CSDE1-202ENST00000339438 ZHX3Q9H4I2 956 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 Q9H521 79 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 PARVBQ9HBI1 364 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 PARVAQ9NVD7 372 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 MKS1Q9NXB0 559 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 RABL2AQ9UBK7 228 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 GTF3C4Q9UKN8 822 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 GPSM3Q9Y4H4 160 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 POTEB3A0JP26 581 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 HOXC11O43248 304 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 ZBTB14O43829 449 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 SNAP91O60641 907 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 GPR32O75388 356 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 SPATA31C1P0DKV0 1188 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 P4HA1P13674 534 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 ATF7P17544 494 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 POLR2EP19388 210 aaKnown RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 NR4A1P22736 598 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 NMT1P30419 496 aaKnown RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 ADSLP30566 484 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 GNA12Q03113 381 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 NFATC3Q12968 1075 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 IKBKEQ14164 716 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 DUSP28Q4G0W2 176 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 CDONQ4KMG0 1287 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 GPATCH4Q5T3I0 446 aaKnown RBP5.71□□□□□ -1.5
CSDE1-202ENST00000339438 POTEBQ6S5H4 581 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 SLC39A5Q6ZMH5 540 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 CAPN12Q6ZSI9 719 aa5.71□□□□□ -1.5
CSDE1-202ENST00000339438 GLRX5Q86SX6 157 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms