RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 FAM72DQ6L9T8 149 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 SLC36A4Q6YBV0 504 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 ARMCX6Q7L4S7 300 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 FAM72BQ86X60 149 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 SLC41A1Q8IVJ1 513 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 DEFB119Q8N690 84 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 PRCCQ92733 491 aaPredicted RBP15.69■□□□□ 0.1
PRKN-201ENST00000338468 SYN2Q92777 582 aaPredicted RBP15.69■□□□□ 0.1
PRKN-201ENST00000338468 TCEAL3Q969E4 200 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 RPL10LQ96L21 214 aaKnown RBP15.69■□□□□ 0.1
PRKN-201ENST00000338468 PSMB7Q99436 277 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 TMEM74BQ9NUR3 256 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 SUN2Q9UH99 717 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 NEU3Q9UQ49 428 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 DOCK4Q8N1I0 1966 aa15.69■□□□□ 0.1
PRKN-201ENST00000338468 CEP192Q8TEP8 1941 aa15.68■□□□□ 0.1
PRKN-201ENST00000338468 SRGAP2O75044 1071 aa15.68■□□□□ 0.1
PRKN-201ENST00000338468 KCNK5O95279 499 aa15.68■□□□□ 0.1
PRKN-201ENST00000338468 FTLP02792 175 aaPredicted RBP15.68■□□□□ 0.1
PRKN-201ENST00000338468 PROS1P07225 676 aa15.68■□□□□ 0.1
PRKN-201ENST00000338468 OXCT1P55809 520 aa15.68■□□□□ 0.1
PRKN-201ENST00000338468 ST8SIA6P61647 398 aa15.68■□□□□ 0.1
PRKN-201ENST00000338468 RNF219Q5W0B1 726 aaPredicted RBP15.68■□□□□ 0.1
PRKN-201ENST00000338468 LRRC31Q6UY01 552 aa15.68■□□□□ 0.1
PRKN-201ENST00000338468 CYP2U1Q7Z449 544 aa15.68■□□□□ 0.1
PRKN-201ENST00000338468 TFAP2DQ7Z6R9 452 aa15.68■□□□□ 0.1
PRKN-201ENST00000338468 FRS2Q8WU20 508 aa15.68■□□□□ 0.1
PRKN-201ENST00000338468 CPLX3Q8WVH0 158 aa15.68■□□□□ 0.1
PRKN-201ENST00000338468 PTPRN2Q92932 1015 aa15.68■□□□□ 0.1
PRKN-201ENST00000338468 NTAN1Q96AB6 310 aa15.68■□□□□ 0.1
PRKN-201ENST00000338468 TOE1Q96GM8 510 aaKnown RBP15.68■□□□□ 0.1
PRKN-201ENST00000338468 OSBPL2Q9H1P3 480 aa15.68■□□□□ 0.1
PRKN-201ENST00000338468 RSPH9Q9H1X1 276 aaPredicted RBP15.68■□□□□ 0.1
PRKN-201ENST00000338468 VPS45Q9NRW7 570 aa15.68■□□□□ 0.1
PRKN-201ENST00000338468 WSB2Q9NYS7 404 aaPredicted RBP15.68■□□□□ 0.1
PRKN-201ENST00000338468 PPARGC1AQ9UBK2 798 aaKnown RBP15.68■□□□□ 0.1
PRKN-201ENST00000338468 GON4LQ3T8J9 2241 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 A0A0D9SEW6 157 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 PATE3B3GLJ2 98 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 AP5Z1O43299 807 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 RTN2O75298 545 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 PLEKP08567 350 aaPredicted RBP15.67■□□□□ 0.1
PRKN-201ENST00000338468 VAV1P15498 845 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 ITPKAP23677 461 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 CD6P30203 668 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 VASPP50552 380 aaPredicted RBP15.67■□□□□ 0.1
PRKN-201ENST00000338468 ZNF252P-AS1Q0IIN9 211 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 SCAPQ12770 1279 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 PEAR1Q5VY43 1037 aaPredicted RBP15.67■□□□□ 0.1
PRKN-201ENST00000338468 PSAPL1Q6NUJ1 521 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 PPP1R2P3Q6NXS1 205 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 RNF214Q8ND24 703 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 ZNF419Q96HQ0 510 aaPredicted RBP15.67■□□□□ 0.1
PRKN-201ENST00000338468 FAM129BQ96TA1 746 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 CNPY3Q9BT09 278 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 TRIM7Q9C029 511 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 ZYG11BQ9C0D3 744 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 ISCUQ9H1K1 167 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 FBRSQ9HAH7 460 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 OR12D3Q9UGF7 316 aa15.67■□□□□ 0.1
PRKN-201ENST00000338468 NYNRINQ9P2P1 1898 aaKnown RBP15.67■□□□□ 0.1
PRKN-201ENST00000338468 TARSL2A2RTX5 802 aaKnown RBP15.66■□□□□ 0.1
PRKN-201ENST00000338468 ATP9BO43861 1147 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 SNAP91O60641 907 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 LRIG2O94898 1065 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 MT-CO1P00395 513 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 RHOCP08134 193 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 CASP14P31944 242 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 SULT2A1Q06520 285 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 ZNF33AQ06730 810 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 ARL13BQ3SXY8 428 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 LYSMD4Q5XG99 296 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 DCUN1D2Q6PH85 259 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 SETD3Q86TU7 594 aaPredicted RBP15.66■□□□□ 0.1
PRKN-201ENST00000338468 NLRP14Q86W24 1093 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 PYROXD2Q8N2H3 581 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 ARFGAP1Q8N6T3 406 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 OR7D4Q8NG98 312 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 PIGKQ92643 395 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 IQCDQ96DY2 449 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 NDFIP2Q9NV92 336 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 PARVAQ9NVD7 372 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 ADAMTS1Q9UHI8 967 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 VPS28Q9UK41 221 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 PILRBQ9UKJ0 227 aa15.66■□□□□ 0.1
PRKN-201ENST00000338468 ATXN2Q99700 1313 aaKnown RBP15.66■□□□□ 0.1
PRKN-201ENST00000338468 EDDM13A0A1B0GTR0 161 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 TMEM191CA6NGB0 347 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 SERPING1P05155 500 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 ACADMP11310 421 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 GLDCP23378 1020 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 OXTRP30559 389 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 OR1E1P30953 314 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 ZBTB16Q05516 673 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 TDRD12Q587J7 1177 aaKnown RBP15.65■□□□□ 0.1
PRKN-201ENST00000338468 ZNF776Q68DI1 518 aaPredicted RBP15.65■□□□□ 0.1
PRKN-201ENST00000338468 UNQ6494/PRO21346Q6UXR6 183 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 TMC6Q7Z403 805 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 SLFN11Q7Z7L1 901 aa15.65■□□□□ 0.1
PRKN-201ENST00000338468 FAM124AQ86V42 546 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms