RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 MYO18AQ92614 2054 aaKnown RBP15.82■□□□□ 0.12
LIMS1-202ENST00000338045 NYNRINQ9P2P1 1898 aaKnown RBP15.82■□□□□ 0.12
LIMS1-202ENST00000338045 VGLL3A8MV65 326 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 LATS1O95835 1130 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 JCHAINP01591 159 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 GABRR2P28476 465 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 ELK3P41970 407 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 MTM1Q13496 603 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 LONRF1Q17RB8 773 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 KCTD11Q693B1 232 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 DENND1CQ8IV53 801 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 LGI2Q8N0V4 545 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 ZNF419Q96HQ0 510 aaPredicted RBP15.82■□□□□ 0.12
LIMS1-202ENST00000338045 AGAP3Q96P47 875 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 SLC22A12Q96S37 553 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 CCDC77Q9BR77 488 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 CENPHQ9H3R5 247 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 RSPH14Q9UHP6 348 aa15.82■□□□□ 0.12
LIMS1-202ENST00000338045 IPO11Q9UI26 975 aaKnown RBP15.82■□□□□ 0.12
LIMS1-202ENST00000338045 AGO1Q9UL18 857 aaKnown RBP15.82■□□□□ 0.12
LIMS1-202ENST00000338045 SHROOM3Q8TF72 1996 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 TLDC2A0PJX2 215 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 ARHGAP42A6NI28 874 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 ERI2A8K979 691 aaKnown RBP15.81■□□□□ 0.12
LIMS1-202ENST00000338045 RASA4BC9J798 803 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 GRM6O15303 877 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 RASA4O43374 803 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 SUN1O94901 812 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 PEX11BO96011 259 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 IVLP07476 585 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 MBL2P11226 248 aaPredicted RBP15.81■□□□□ 0.12
LIMS1-202ENST00000338045 GRIA1P42261 906 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 YBEYP58557 167 aaPredicted RBP15.81■□□□□ 0.12
LIMS1-202ENST00000338045 PARP15Q460N3 678 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 DNAJC21Q5F1R6 531 aaKnown RBP15.81■□□□□ 0.12
LIMS1-202ENST00000338045 ADGRF1Q5T601 910 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 FAM109BQ6ICB4 259 aaPredicted RBP15.81■□□□□ 0.12
LIMS1-202ENST00000338045 LRRC8BQ6P9F7 803 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 RFWD3Q6PCD5 774 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 HS6ST3Q8IZP7 471 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 ADAMTS19Q8TE59 1207 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 WBP2Q969T9 261 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 HMCESQ96FZ2 354 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 SIGLEC10Q96LC7 697 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 YY1AP1Q9H869 796 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 VPS37BQ9H9H4 285 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 EURLQ9NYK6 297 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 CHMP2BQ9UQN3 213 aa15.81■□□□□ 0.12
LIMS1-202ENST00000338045 MTCL1Q9Y4B5 1905 aaKnown RBP15.8■□□□□ 0.12
LIMS1-202ENST00000338045 GRXCR1A8MXD5 290 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 GREM1O60565 184 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 SPAG6O75602 509 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 AP2A1O95782 977 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 HDCP19113 662 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 NFKB1P19838 968 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 SSTR1P30872 391 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 PHBP35232 272 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 IRS1P35568 1242 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 SLCO1A2P46721 670 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 LMAN1P49257 510 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 ANO4Q32M45 955 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 TXNDC8Q6A555 127 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 C3orf62Q6ZUJ4 267 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 CIR1Q86X95 450 aaPredicted RBP15.8■□□□□ 0.12
LIMS1-202ENST00000338045 PALM2Q8IXS6 379 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 ELMOD1Q8N336 334 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 ARL14EPQ8N8R7 260 aaPredicted RBP15.8■□□□□ 0.12
LIMS1-202ENST00000338045 SLC22A17Q8WUG5 538 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 MRPS31Q92665 395 aaKnown RBP15.8■□□□□ 0.12
LIMS1-202ENST00000338045 PRICKLE1Q96MT3 831 aaPredicted RBP15.8■□□□□ 0.12
LIMS1-202ENST00000338045 SAMD11Q96NU1 681 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 CYP2S1Q96SQ9 504 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 PPCSQ9HAB8 311 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 FETUBQ9UGM5 382 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 LGALS13Q9UHV8 139 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 NOVA2Q9UNW9 492 aaKnown RBP15.8■□□□□ 0.12
LIMS1-202ENST00000338045 DENND4CQ5VZ89 1909 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 F5H423 210 aaPredicted RBP15.8■□□□□ 0.12
LIMS1-202ENST00000338045 H3BNC9 293 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 RGS16O15492 202 aaPredicted RBP15.8■□□□□ 0.12
LIMS1-202ENST00000338045 RAMP2O60895 175 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 AGTP01019 485 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 PFKLP17858 780 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 CDC25CP30307 473 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 OR1E1P30953 314 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 IFNAR2P48551 515 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 EPHA5P54756 1037 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 CDH4P55283 916 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 SLC7A9P82251 487 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 ZXDBP98169 803 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 GABPB1Q06547 395 aaPredicted RBP15.8■□□□□ 0.12
LIMS1-202ENST00000338045 HNRNPDQ14103 355 aaKnown RBP15.8■□□□□ 0.12
LIMS1-202ENST00000338045 RASA2Q15283 850 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 RABGAP1LQ5R372 815 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 PPM1LQ5SGD2 360 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 TDRPQ86YL5 185 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 TRPC7Q9HCX4 862 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 SMPD4Q9NXE4 827 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 RABGEF1Q9UJ41 708 aa15.8■□□□□ 0.12
LIMS1-202ENST00000338045 CHD7Q9P2D1 2997 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms