RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 FBXO36Q8NEA4 188 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 FICDQ9BVA6 458 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 GPRC5DQ9NZD1 345 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 SUCOQ9UBS9 1254 aaKnown RBP12.47□□□□□ -0.41
FN1-202ENST00000336916 RGS5O15539 181 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 ITGA2P17301 1181 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 GRIK3Q13003 919 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 DENND6AQ8IWF6 608 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 TIFAQ96CG3 184 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 PRDM8Q9NQV8 689 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 LAMA4Q16363 1823 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 APOC4-APOC2K7ER74 178 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 APOC2P02655 101 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 BTKQ06187 659 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 ADHFE1Q8IWW8 467 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 MYCBPAPQ8TBZ2 947 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 ZNF606Q8WXB4 792 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 ZYG11BQ9C0D3 744 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 SENP6Q9GZR1 1112 aaPredicted RBP12.47□□□□□ -0.41
FN1-202ENST00000336916 ALG13Q9NP73 1137 aaKnown RBP12.47□□□□□ -0.41
FN1-202ENST00000336916 GPN3Q9UHW5 284 aaPredicted RBP12.47□□□□□ -0.41
FN1-202ENST00000336916 MRPS17Q9Y2R5 130 aaKnown RBP12.47□□□□□ -0.41
FN1-202ENST00000336916 ZNF711Q9Y462 761 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 RBM47A0AV96 593 aaKnown RBP12.47□□□□□ -0.41
FN1-202ENST00000336916 CA12O43570 354 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 FGFR1P11362 822 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 ZNF23P17027 643 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 CXCL9Q07325 125 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 CNGA2Q16280 664 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 SPOCD1Q6ZMY3 1216 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 POMGNT2Q8NAT1 580 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 DLG3Q92796 817 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 FAM111AQ96PZ2 611 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 PDCD2LQ9BRP1 358 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 ABCC6O95255 1503 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 SIGLEC16A6NMB1 481 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 UBDO15205 165 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 SLC25A12O75746 678 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 HNRNPCP07910 306 aaKnown RBP eCLIP12.47□□□□□ -0.411e-6■■□□□ 14.2
FN1-202ENST00000336916 BIKQ13323 160 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 RRP1BQ14684 758 aaKnown RBP12.47□□□□□ -0.41
FN1-202ENST00000336916 POU6F1Q14863 301 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 RFTN2Q52LD8 501 aaPredicted RBP12.47□□□□□ -0.41
FN1-202ENST00000336916 STAG3L4Q8TBR4 150 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 ACER1Q8TDN7 264 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 ACMSDQ8TDX5 336 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 BBS2Q9BXC9 721 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 POLR1BQ9H9Y6 1135 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 IL1RL2Q9HB29 575 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 RXFP1Q9HBX9 757 aa12.47□□□□□ -0.41
FN1-202ENST00000336916 MRPS23Q9Y3D9 190 aaKnown RBP12.47□□□□□ -0.41
FN1-202ENST00000336916 USP17L7P0C7H9 530 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 PBLDP30039 288 aaPredicted RBP12.46□□□□□ -0.41
FN1-202ENST00000336916 CRYBB1P53674 252 aaPredicted RBP12.46□□□□□ -0.41
FN1-202ENST00000336916 DCLRE1AQ6PJP8 1040 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 FAM43BQ6ZT52 329 aaPredicted RBP12.46□□□□□ -0.41
FN1-202ENST00000336916 WDR36Q8NI36 951 aaKnown RBP12.46□□□□□ -0.41
FN1-202ENST00000336916 MTERF3Q96E29 417 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 ADAM28Q9UKQ2 775 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 TSHRP16473 764 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 OGNP20774 298 aaKnown RBP12.46□□□□□ -0.41
FN1-202ENST00000336916 WEE1P30291 646 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 INAVAQ3KP66 663 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 NT5DC1Q5TFE4 455 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 CPA6Q8N4T0 437 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 LRRC52Q8N7C0 313 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 OR52L1Q8NGH7 329 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 USP6NLQ92738 828 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 ATP6V1HQ9UI12 483 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 TPRKBQ9Y3C4 175 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 ATMINO43313 823 aaPredicted RBP12.46□□□□□ -0.41
FN1-202ENST00000336916 PDE9AO76083 593 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 SERPINE1P05121 402 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 FNDC5Q8NAU1 212 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 REXO5Q96IC2 774 aaKnown RBP12.46□□□□□ -0.41
FN1-202ENST00000336916 AKAP11Q9UKA4 1901 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 ARP10275 920 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 ANTXR2P58335 489 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 KCNT1Q5JUK3 1230 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 TXNDC11Q6PKC3 985 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 KATNAL2Q8IYT4 538 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 MCOLN2Q8IZK6 566 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 GALNT8Q9NY28 637 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 TNFSF13BQ9Y275 285 aa12.46□□□□□ -0.41
FN1-202ENST00000336916 CACNB4O00305 520 aaPredicted RBP12.46□□□□□ -0.42
FN1-202ENST00000336916 TYMPP19971 482 aa12.46□□□□□ -0.42
FN1-202ENST00000336916 CLEC10AQ8IUN9 316 aa12.46□□□□□ -0.42
FN1-202ENST00000336916 MYLK2Q9H1R3 596 aa12.46□□□□□ -0.42
FN1-202ENST00000336916 DDX60Q8IY21 1712 aaKnown RBP12.46□□□□□ -0.42
FN1-202ENST00000336916 C21orf59P57076 290 aa12.46□□□□□ -0.42
FN1-202ENST00000336916 PRAMEF18Q5VWM3 479 aa12.46□□□□□ -0.42
FN1-202ENST00000336916 ADAMTSL2Q86TH1 951 aa12.46□□□□□ -0.42
FN1-202ENST00000336916 FAM131BQ86XD5 332 aa12.46□□□□□ -0.42
FN1-202ENST00000336916 C9orf16Q9BUW7 83 aa12.46□□□□□ -0.42
FN1-202ENST00000336916 SERHL2Q9H4I8 314 aa12.46□□□□□ -0.42
FN1-202ENST00000336916 A1CFQ9NQ94 594 aaKnown RBP12.46□□□□□ -0.42
FN1-202ENST00000336916 SERHLQ9NQF3 203 aa12.46□□□□□ -0.42
FN1-202ENST00000336916 VAV3Q9UKW4 847 aa12.46□□□□□ -0.42
FN1-202ENST00000336916 KPNA3O00505 521 aaPredicted RBP12.45□□□□□ -0.42
FN1-202ENST00000336916 SGPL1O95470 568 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms