RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 SMYD1Q8NB12 490 aa10.78□□□□□ -0.68
AP1S3-201ENST00000334271 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.78□□□□□ -0.68
AP1S3-201ENST00000334271 HIC2Q96JB3 615 aa10.78□□□□□ -0.68
AP1S3-201ENST00000334271 HAPLN3Q96S86 360 aa10.78□□□□□ -0.68
AP1S3-201ENST00000334271 SNRNP25Q9BV90 132 aaKnown RBP10.78□□□□□ -0.68
AP1S3-201ENST00000334271 FRMD8Q9BZ67 464 aaPredicted RBP10.78□□□□□ -0.68
AP1S3-201ENST00000334271 PCDH18Q9HCL0 1135 aa10.78□□□□□ -0.68
AP1S3-201ENST00000334271 CD93Q9NPY3 652 aa10.78□□□□□ -0.68
AP1S3-201ENST00000334271 TMLHEQ9NVH6 421 aa10.78□□□□□ -0.68
AP1S3-201ENST00000334271 DDX18Q9NVP1 670 aaKnown RBP10.78□□□□□ -0.68
AP1S3-201ENST00000334271 TUBA8Q9NY65 449 aaPredicted RBP10.78□□□□□ -0.68
AP1S3-201ENST00000334271 SMARCAL1Q9NZC9 954 aa10.78□□□□□ -0.68
AP1S3-201ENST00000334271 ZFATQ9P243 1243 aa10.78□□□□□ -0.68
AP1S3-201ENST00000334271 FBXW11Q9UKB1 542 aa10.78□□□□□ -0.68
AP1S3-201ENST00000334271 EDARQ9UNE0 448 aa10.78□□□□□ -0.68
AP1S3-201ENST00000334271 PCDHB12Q9Y5F1 795 aa10.78□□□□□ -0.68
AP1S3-201ENST00000334271 I3L4J1 428 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 GLUD2P49448 558 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 SLC5A3P53794 718 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 KRT17Q04695 432 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 CALCOCO2Q13137 446 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 PAN2Q504Q3 1202 aaKnown RBP10.77□□□□□ -0.68
AP1S3-201ENST00000334271 CRTC2Q53ET0 693 aaPredicted RBP10.77□□□□□ -0.68
AP1S3-201ENST00000334271 NXNQ6DKJ4 435 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 KLHDC10Q6PID8 442 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 FAM47EQ6ZV65 393 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 COLGALT1Q8NBJ5 622 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 SP7Q8TDD2 431 aaPredicted RBP10.77□□□□□ -0.68
AP1S3-201ENST00000334271 HASPINQ8TF76 798 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 HERVK_113Q902F9 699 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 RTP4Q96DX8 246 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 SERPINB11Q96P15 392 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 LPIN3Q9BQK8 851 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 HTATIP2Q9BUP3 242 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 PCDH9Q9HC56 1237 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 POLMQ9NP87 494 aaPredicted RBP10.77□□□□□ -0.68
AP1S3-201ENST00000334271 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.77□□□□□ -0.68
AP1S3-201ENST00000334271 FAM53CQ9NYF3 392 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 SIRPGQ9P1W8 387 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 CACNG4Q9UBN1 327 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 AP4E1Q9UPM8 1137 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 NEU2Q9Y3R4 380 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 INSL6Q9Y581 213 aa10.77□□□□□ -0.68
AP1S3-201ENST00000334271 TET1Q8NFU7 2136 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 BCLAF3A2AJT9 711 aaKnown RBP10.77□□□□□ -0.69
AP1S3-201ENST00000334271 MTMR11A4FU01 709 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 M0QYT0 321 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 APOL1O14791 398 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 TTI1O43156 1089 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 ABLIM3O94929 683 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 CSF2RAP15509 400 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 PFKLP17858 780 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 XPAP23025 273 aaPredicted RBP10.77□□□□□ -0.69
AP1S3-201ENST00000334271 IGFBP6P24592 240 aaPredicted RBP10.77□□□□□ -0.69
AP1S3-201ENST00000334271 L1CAMP32004 1257 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 TUBP50607 506 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 YWHAGP61981 247 aaKnown RBP eCLIP10.77□□□□□ -0.69
AP1S3-201ENST00000334271 UBE3AQ05086 875 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 PPIDQ08752 370 aaKnown RBP10.77□□□□□ -0.69
AP1S3-201ENST00000334271 RAB33AQ14088 237 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 BTG3Q14201 252 aaPredicted RBP10.77□□□□□ -0.69
AP1S3-201ENST00000334271 NOMO1Q15155 1222 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 PSMD5Q16401 504 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 C15orf59Q2T9L4 293 aaPredicted RBP10.77□□□□□ -0.69
AP1S3-201ENST00000334271 ANKRD20A8PQ5CZ79 823 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 BSPRYQ5W0U4 402 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 BTBD8Q5XKL5 378 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 CPNE8Q86YQ8 564 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 ZDHHC14Q8IZN3 488 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 ALLCQ8N6M5 410 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 FBXO22Q8NEZ5 403 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 CASKIN2Q8WXE0 1202 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 P3H4Q92791 437 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 NRBF2Q96F24 287 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 SNF8Q96H20 258 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 PIWIL1Q96J94 861 aaKnown RBP10.77□□□□□ -0.69
AP1S3-201ENST00000334271 PEBP4Q96S96 227 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 KCNK16Q96T55 309 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 NUDT16L1Q9BRJ7 211 aaKnown RBP10.77□□□□□ -0.69
AP1S3-201ENST00000334271 FUT8Q9BYC5 575 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 VPS37BQ9H9H4 285 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 RXFP1Q9HBX9 757 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 SRA1Q9HD15 236 aaKnown RBP10.77□□□□□ -0.69
AP1S3-201ENST00000334271 TLR8Q9NR97 1041 aaKnown RBP10.77□□□□□ -0.69
AP1S3-201ENST00000334271 SLC4A7Q9Y6M7 1214 aa10.77□□□□□ -0.69
AP1S3-201ENST00000334271 ENO4A6NNW6 628 aa10.76□□□□□ -0.69
AP1S3-201ENST00000334271 YJEFN3A6XGL0 299 aa10.76□□□□□ -0.69
AP1S3-201ENST00000334271 E7ENQ6 273 aa10.76□□□□□ -0.69
AP1S3-201ENST00000334271 MTSS1O43312 755 aa10.76□□□□□ -0.69
AP1S3-201ENST00000334271 CST8O60676 142 aa10.76□□□□□ -0.69
AP1S3-201ENST00000334271 FYNP06241 537 aa10.76□□□□□ -0.69
AP1S3-201ENST00000334271 S100A6P06703 90 aa10.76□□□□□ -0.69
AP1S3-201ENST00000334271 CPB1P15086 417 aa10.76□□□□□ -0.69
AP1S3-201ENST00000334271 ADRA1BP35368 520 aa10.76□□□□□ -0.69
AP1S3-201ENST00000334271 HSPA9P38646 679 aaKnown RBP10.76□□□□□ -0.69
AP1S3-201ENST00000334271 ASMTP46597 345 aa10.76□□□□□ -0.69
AP1S3-201ENST00000334271 ATP11AP98196 1134 aa10.76□□□□□ -0.69
AP1S3-201ENST00000334271 MAJINQ3KP22 176 aa10.76□□□□□ -0.69
AP1S3-201ENST00000334271 ATP13A4Q4VNC1 1196 aa10.76□□□□□ -0.69
AP1S3-201ENST00000334271 SLC45A4Q5BKX6 768 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms