RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 KLHL28Q9NXS3 571 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 KLK14Q9P0G3 267 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 STOX2Q9P2F5 926 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 VPS9D1Q9Y2B5 631 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 CFAP74Q9C0B2 1584 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 A8MUI8 341 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 TNNI3P19429 210 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 INO80DQ53TQ3 878 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 PYHIN1Q6K0P9 492 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 AMIGO2Q86SJ2 522 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 ACTRT1Q8TDG2 376 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 GNPTGQ9UJJ9 305 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 FADS2O95864 444 aaKnown RBP12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 OR1G1P47890 313 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 EFNA5P52803 228 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 PRR5LQ6MZQ0 368 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 FAM117BQ6P1L5 589 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 FOXP4Q8IVH2 680 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 ZC3H7AQ8IWR0 971 aaKnown RBP12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 ATXN2LQ8WWM7 1075 aaKnown RBP12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 TMEM5Q9Y2B1 443 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 STX16-NPEPL1H3BU86 382 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 STX16O14662 325 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 NRP2O60462 931 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 OR5F1O95221 314 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 RBP1P09455 135 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 CLUP10909 449 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 PAGE2BQ5JRK9 111 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 CARNMT1Q8N4J0 409 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 ACTRT2Q8TDY3 377 aa12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 DCP1AQ9NPI6 582 aaPredicted RBP12.96□□□□□ -0.33
RAB11FIP1-202ENST00000330843 FAM237BA0A1B0GVD1 139 aa12.96□□□□□ -0.34
RAB11FIP1-202ENST00000330843 NR4A1P22736 598 aa12.96□□□□□ -0.34
RAB11FIP1-202ENST00000330843 MGAT1P26572 445 aa12.96□□□□□ -0.34
RAB11FIP1-202ENST00000330843 RPP38P78345 283 aaKnown RBP12.96□□□□□ -0.34
RAB11FIP1-202ENST00000330843 TMC3Q7Z5M5 1100 aa12.96□□□□□ -0.34
RAB11FIP1-202ENST00000330843 AIFM2Q9BRQ8 373 aa12.96□□□□□ -0.34
RAB11FIP1-202ENST00000330843 NPC1L1Q9UHC9 1359 aa12.96□□□□□ -0.34
RAB11FIP1-202ENST00000330843 TRAPPC3O43617 180 aa12.96□□□□□ -0.34
RAB11FIP1-202ENST00000330843 BMP10O95393 424 aa12.96□□□□□ -0.34
RAB11FIP1-202ENST00000330843 POLR2EP19388 210 aaKnown RBP12.96□□□□□ -0.34
RAB11FIP1-202ENST00000330843 NT5C2P49902 561 aa12.96□□□□□ -0.34
RAB11FIP1-202ENST00000330843 SAMD4BQ5PRF9 694 aaKnown RBP12.96□□□□□ -0.34
RAB11FIP1-202ENST00000330843 IL27RAQ6UWB1 636 aa12.96□□□□□ -0.34
RAB11FIP1-202ENST00000330843 TBC1D10AQ9BXI6 508 aa12.96□□□□□ -0.34
RAB11FIP1-202ENST00000330843 CHIAQ9BZP6 476 aa12.96□□□□□ -0.34
RAB11FIP1-202ENST00000330843 TPK1Q9H3S4 243 aa12.96□□□□□ -0.34
RAB11FIP1-202ENST00000330843 DNAAF2Q9NVR5 837 aaKnown RBP12.96□□□□□ -0.34
RAB11FIP1-202ENST00000330843 SSR3Q9UNL2 185 aa12.96□□□□□ -0.34
RAB11FIP1-202ENST00000330843 FDPSP14324 419 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 ARL3P36405 182 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 NEK3P51956 506 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 SUSD4Q5VX71 490 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 TP53INP1Q96A56 240 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 C1QTNF1Q9BXJ1 281 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 ZNF350Q9GZX5 532 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 VTI1BQ9UEU0 232 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 EPHA7Q15375 998 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 SLFN11Q7Z7L1 901 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 FBXW8Q8N3Y1 598 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 BBS4Q96RK4 519 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 CRYL1Q9Y2S2 319 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 LAMC1P11047 1609 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 MTSS1O43312 755 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 SERPINE1P05121 402 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 CHKAP35790 457 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 ATF7IP2Q5U623 682 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 STOX1Q6ZVD7 989 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 GALNT5Q7Z7M9 940 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 RTKN2Q8IZC4 609 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 TUBGCP5Q96RT8 1024 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 SYNMO15061 1565 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 ARHGAP31Q2M1Z3 1444 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 A8MX80 341 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 CD44P16070 742 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 MYL9P24844 172 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 ELK3P41970 407 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 PPP2R2BQ00005 443 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 MTAPQ13126 283 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 FAM182BQ5T319 152 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 GRTP1Q5TC63 336 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 L2HGDHQ9H9P8 463 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 ABCA10Q8WWZ4 1543 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 DYRK3O43781 588 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 SHBGP04278 402 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 MAN2A2P49641 1150 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 AP2S1P53680 142 aaPredicted RBP12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 MTSS1LQ765P7 747 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 OFCC1Q8IZS5 231 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 BTBD9Q96Q07 612 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 HGH1Q9BTY7 390 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 ZSCAN5AQ9BUG6 496 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 SLC24A2Q9UI40 661 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 SHOC2Q9UQ13 582 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 RBM7Q9Y580 266 aaKnown RBP12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 AFF2P51816 1311 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 C2orf71A6NGG8 1288 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 IFNGR2P38484 337 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 MYBPC1Q00872 1141 aa12.95□□□□□ -0.34
RAB11FIP1-202ENST00000330843 PDIA5Q14554 519 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms