RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 VPS45Q9NRW7 570 aa6.58□□□□□ -1.36
SMG1-201ENST00000330588 RRN3Q9NYV6 651 aa6.58□□□□□ -1.36
SMG1-201ENST00000330588 THAP10Q9P2Z0 257 aaPredicted RBP6.58□□□□□ -1.36
SMG1-201ENST00000330588 EVLQ9UI08 416 aaPredicted RBP6.58□□□□□ -1.36
SMG1-201ENST00000330588 OAS3Q9Y6K5 1087 aaKnown RBP6.58□□□□□ -1.36
SMG1-201ENST00000330588 MUC22E2RYF6 1773 aaPredicted RBP6.58□□□□□ -1.36
SMG1-201ENST00000330588 BECN2A8MW95 431 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 SGK1O00141 431 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 MDM4O15151 490 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 LSM8O95777 96 aaKnown RBP6.57□□□□□ -1.36
SMG1-201ENST00000330588 IGLV3-19P01714 112 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 IGLV3-25P01717 112 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 KRT5P13647 590 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 HOXB2P14652 356 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 HOXD9P28356 352 aaPredicted RBP6.57□□□□□ -1.36
SMG1-201ENST00000330588 FAM193AP78312 1265 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 MESP2Q0VG99 397 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 EIF4EBP2Q13542 120 aaPredicted RBP6.57□□□□□ -1.36
SMG1-201ENST00000330588 EFHC1Q5JVL4 640 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 ALG1LQ6GMV1 187 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 DPY19L2P1Q6NXN4 242 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 TPGS1Q6ZTW0 290 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 ARCQ7LC44 396 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 DENND1CQ8IV53 801 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 TRIM42Q8IWZ5 723 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 FAM71AQ8IYT1 594 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 RMDN1Q96DB5 314 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 SLC39A13Q96H72 371 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 POPDC2Q9HBU9 364 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 PARD6AQ9NPB6 346 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 USP18Q9UMW8 372 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 CEP83Q9Y592 693 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 TNRC6BQ9UPQ9 1833 aaKnown RBP6.57□□□□□ -1.36
SMG1-201ENST00000330588 A0A1W2PQF6 199 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 TYW5A2RUC4 315 aaKnown RBP6.57□□□□□ -1.36
SMG1-201ENST00000330588 KCNJ18B7U540 433 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 PRRT4C9JH25 899 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 DDX3YO15523 660 aaKnown RBP6.57□□□□□ -1.36
SMG1-201ENST00000330588 AP5Z1O43299 807 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 PAX4O43316 350 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 THAP12O43422 761 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 ACSL4O60488 711 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 HSF2BPO75031 334 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 LETM1O95202 739 aaPredicted RBP6.57□□□□□ -1.36
SMG1-201ENST00000330588 ASLP04424 464 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 TPM2P07951 284 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 NCAM1P13591 858 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 LCP1P13796 627 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 GABRG2P18507 467 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 SLC9A1P19634 815 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 MPLP40238 635 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 GP2P55259 537 aaKnown RBP6.57□□□□□ -1.36
SMG1-201ENST00000330588 OXCT1P55809 520 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 TBX4P57082 545 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 YWHAZP63104 245 aaKnown RBP6.57□□□□□ -1.36
SMG1-201ENST00000330588 PDCLQ13371 301 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 SLC12A1Q13621 1099 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 KCNJ12Q14500 433 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 STARD3Q14849 445 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.57□□□□□ -1.36
SMG1-201ENST00000330588 TCP11X2Q5H9J9 407 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 PIK3R6Q5UE93 754 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 CDKAL1Q5VV42 579 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 EGFLAMQ63HQ2 1017 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 TOGARAM2Q6ZUX3 1019 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 LPCAT2Q7L5N7 544 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 SLC26A9Q7LBE3 791 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 ZNF677Q86XU0 584 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 FAM20CQ8IXL6 584 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 AHI1Q8N157 1196 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 DCLK2Q8N568 766 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 CCDC33Q8N5R6 958 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 NAT16Q8N8M0 369 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 HJURPQ8NCD3 748 aaPredicted RBP6.57□□□□□ -1.36
SMG1-201ENST00000330588 FIBINQ8TAL6 211 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 DQX1Q8TE96 717 aaKnown RBP6.57□□□□□ -1.36
SMG1-201ENST00000330588 UBASH3BQ8TF42 649 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 TMA16Q96EY4 203 aaKnown RBP6.57□□□□□ -1.36
SMG1-201ENST00000330588 KLHDC7BQ96G42 594 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 BTN2A3PQ96KV6 586 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 FCRL2Q96LA5 508 aaPredicted RBP6.57□□□□□ -1.36
SMG1-201ENST00000330588 SLC2A13Q96QE2 648 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 NAA15Q9BXJ9 866 aaKnown RBP6.57□□□□□ -1.36
SMG1-201ENST00000330588 USP36Q9P275 1121 aaKnown RBP6.57□□□□□ -1.36
SMG1-201ENST00000330588 DNAJC12Q9UKB3 198 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 NUDT5Q9UKK9 219 aa6.57□□□□□ -1.36
SMG1-201ENST00000330588 CKAP5Q14008 2032 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 ITIH6Q6UXX5 1313 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 KRTAP4-8A0A0G2JLE6 195 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 CXorf51AA0A1B0GTR3 108 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 TCRBV21S2A2A0A5A6 115 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 HMX2A2RU54 273 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 LRRC10BA6NIK2 292 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 H3BRJ5 948 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 PAPSS1O43252 624 aaPredicted RBP6.56□□□□□ -1.36
SMG1-201ENST00000330588 DAB1O75553 588 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 APOEP02649 317 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 FYNP06241 537 aa6.56□□□□□ -1.36
SMG1-201ENST00000330588 ATP5BP06576 529 aaKnown RBP6.56□□□□□ -1.36
SMG1-201ENST00000330588 GBP1P32455 592 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms