RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 SAPCD2Q86UD0 394 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 PRELID2Q8N945 189 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 SLITRK1Q96PX8 696 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 SLC4A5Q9BY07 1137 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 C17orf75Q9HAS0 396 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 DOLKQ9UPQ8 538 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 TSC2P49815 1807 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 UBA6A0AVT1 1052 aaPredicted RBP7.18□□□□□ -1.26
SMC1A-201ENST00000322213 SSNA1O43805 119 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 NUP62P37198 522 aaPredicted RBP7.18□□□□□ -1.26
SMC1A-201ENST00000322213 NAMPTP43490 491 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF276Q8N554 614 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 ZSWIM2Q8NEG5 633 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 C7orf26Q96N11 449 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 RAD54BQ9Y620 910 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 KIAA1551Q9HCM1 1747 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 A0A087X1B8 175 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 RRM1P23921 792 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 PID1Q7Z2X4 250 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 KBTBD2Q8IY47 623 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 GOLM1Q8NBJ4 401 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 AGAP3Q96P47 875 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 HNRNPABQ99729 332 aaKnown RBP7.18□□□□□ -1.26
SMC1A-201ENST00000322213 EPB41L1Q9H4G0 881 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 LRRC40Q9H9A6 602 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 SARS2Q9NP81 518 aaKnown RBP7.18□□□□□ -1.26
SMC1A-201ENST00000322213 PHF3Q92576 2039 aaKnown RBP7.18□□□□□ -1.26
SMC1A-201ENST00000322213 G3V2T6 193 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 NCAM2O15394 837 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 SCNN1DP51172 638 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 MGAT5Q09328 741 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 LPCAT4Q643R3 524 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 ISLR2Q6UXK2 745 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 SPOCD1Q6ZMY3 1216 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 MCOLN2Q8IZK6 566 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 EMC1Q8N766 993 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 RBM4BQ9BQ04 359 aaKnown RBP7.18□□□□□ -1.26
SMC1A-201ENST00000322213 RBM4Q9BWF3 364 aaKnown RBP7.18□□□□□ -1.26
SMC1A-201ENST00000322213 CADM1Q9BY67 442 aaKnown RBP7.18□□□□□ -1.26
SMC1A-201ENST00000322213 ELOVL6Q9H5J4 265 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 C12orf4Q9NQ89 552 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 ZNF219Q9P2Y4 722 aaPredicted RBP7.18□□□□□ -1.26
SMC1A-201ENST00000322213 POLG2Q9UHN1 485 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 BAIAP2Q9UQB8 552 aa7.18□□□□□ -1.26
SMC1A-201ENST00000322213 SLC22A1O15245 554 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 CSPG5O95196 566 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 ATG7O95352 703 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 NEK3P51956 506 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 ACSBG2Q5FVE4 666 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 TTC23Q5W5X9 447 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 C16orf62Q7Z3J2 963 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 TDRPQ86YL5 185 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 CCDC28AQ8IWP9 274 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 MCFD2Q8NI22 146 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 EIF3LQ9Y262 564 aaKnown RBP7.17□□□□□ -1.26
SMC1A-201ENST00000322213 A0A1W2PRG6 482 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 TTLL13PA6NNM8 815 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 USP17L10C9JJH3 530 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 H7C0S8 307 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 MAPK10P53779 464 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 MYL6P60660 151 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 RIPPLY1Q0D2K3 151 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 RFX4Q33E94 735 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 PUS10Q3MIT2 529 aaKnown RBP7.17□□□□□ -1.26
SMC1A-201ENST00000322213 BOLA3Q53S33 107 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 WDR45BQ5MNZ6 344 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 MOXD1Q6UVY6 613 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 C16orf86Q6ZW13 317 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 STK32CQ86UX6 486 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 BPIFB6Q8NFQ5 453 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 FIG4Q92562 907 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 FAM49BQ9NUQ9 324 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 MOSPD1Q9UJG1 213 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 FEM1BQ9UK73 627 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 ADAM28Q9UKQ2 775 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 A0A0J9YVX5 310 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 TSPAN1O60635 241 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 CLPXO76031 633 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 EPN2O95208 641 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 PDGFRAP16234 1089 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 SLC12A3P55017 1021 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 GIT2Q14161 759 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 ZBED5Q49AG3 693 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 TMEM119Q4V9L6 283 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 TNFAIP8L3Q5GJ75 292 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 ANGEL2Q5VTE6 544 aaKnown RBP7.17□□□□□ -1.26
SMC1A-201ENST00000322213 METTL23Q86XA0 190 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 PIK3R3Q92569 461 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 RMDN3Q96TC7 470 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 DOCK6Q96HP0 2047 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 FAM205AQ6ZU69 1335 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 MAPK1P28482 360 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 CRHR1P34998 444 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 SULT1E1P49888 294 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 HSF2Q03933 536 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 FOXD4Q12950 439 aaPredicted RBP7.17□□□□□ -1.26
SMC1A-201ENST00000322213 NADK2Q4G0N4 442 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 INO80DQ53TQ3 878 aaPredicted RBP7.17□□□□□ -1.26
SMC1A-201ENST00000322213 LIPMQ5VYY2 423 aa7.17□□□□□ -1.26
SMC1A-201ENST00000322213 HERC6Q8IVU3 1022 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms