RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 C15orf41Q9Y2V0 281 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 CYP7B1O75881 506 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 TNFAIP8L3Q5GJ75 292 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 HECTD3Q5T447 861 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 NYAP1Q6ZVC0 841 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 ZNF276Q8N554 614 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 CD101Q93033 1021 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 SMARCD1Q96GM5 515 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 NUDT12Q9BQG2 462 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 SPAG4Q9NPE6 437 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 KLRC1P26715 233 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 NME5P56597 212 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 ZNF280DQ6N043 979 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 HDAC7Q8WUI4 952 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 KCNF1Q9H3M0 494 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 MCUBQ9NWR8 336 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 ZNF214Q9UL59 606 aaPredicted RBP15.73■□□□□ 0.11
HCFC1-201ENST00000310441 DISP1Q96F81 1524 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 ASTN2O75129 1339 aaPredicted RBP15.73■□□□□ 0.11
HCFC1-201ENST00000310441 PTGES3LE9PB15 166 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 RASSF6Q6ZTQ3 369 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 NSUN4Q96CB9 384 aaKnown RBP15.73■□□□□ 0.11
HCFC1-201ENST00000310441 FAIM2Q9BWQ8 316 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 SNX4O95219 450 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 CYP2F1P24903 491 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 S100A3P33764 101 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 STK4Q13043 487 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 RUNDC3AQ59EK9 446 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 RETSATQ6NUM9 610 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 GNPTGQ9UJJ9 305 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 SLC9A8Q9Y2E8 581 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 CCNT2O60583 730 aaKnown RBP15.73■□□□□ 0.11
HCFC1-201ENST00000310441 ULK3Q6PHR2 472 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 PHF10Q8WUB8 498 aaKnown RBP15.73■□□□□ 0.11
HCFC1-201ENST00000310441 MAPTP10636 758 aaKnown RBP15.73■□□□□ 0.11
HCFC1-201ENST00000310441 RAP1GAPP47736 663 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 CSHL1Q14406 222 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 PYHIN1Q6K0P9 492 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 MPZL3Q6UWV2 235 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 PFDN2Q9UHV9 154 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 PCDHA3Q9Y5H8 950 aa15.73■□□□□ 0.11
HCFC1-201ENST00000310441 ALADP13716 330 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 MAPK8P45983 427 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 PAPD7Q5XG87 772 aaKnown RBP15.72■□□□□ 0.11
HCFC1-201ENST00000310441 GPSM1Q86YR5 675 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 CATSPERZQ9NTU4 200 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 MADDQ8WXG6 1647 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 CYB561D2O14569 222 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 RAMP2O60895 175 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 CTSHP09668 335 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 GNASQ5JWF2 1037 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 NOA1Q8NC60 698 aaKnown RBP15.72■□□□□ 0.11
HCFC1-201ENST00000310441 RASSF1Q9NS23 344 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 A0A1W2PQ72 361 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 SETMARQ53H47 684 aaPredicted RBP15.72■□□□□ 0.11
HCFC1-201ENST00000310441 GLT6D1Q7Z4J2 308 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 MILR1Q7Z6M3 343 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 SERPINB11Q96P15 392 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 IGSF6O95976 241 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 APOC1P02654 83 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 PCSK2P16519 638 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 MTAPQ13126 283 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 BAATQ14032 418 aaPredicted RBP15.72■□□□□ 0.11
HCFC1-201ENST00000310441 EIF1ADQ8N9N8 165 aaKnown RBP15.72■□□□□ 0.11
HCFC1-201ENST00000310441 NKRFO15226 690 aaKnown RBP eCLIP15.72■□□□□ 0.11
HCFC1-201ENST00000310441 UBOX5O94941 541 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 RPS6KA3P51812 740 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 PLIN5Q00G26 463 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 SLC15A2Q16348 729 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 PSMA8Q8TAA3 256 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 CRAMP1Q96RY5 1269 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 CGRRF1Q99675 332 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 TRIM2Q9C040 744 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 ETAA1Q9NY74 926 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 GMIPQ9P107 970 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 FGF10O15520 208 aaPredicted RBP15.72■□□□□ 0.11
HCFC1-201ENST00000310441 SEC24AO95486 1093 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 DGKAP23743 735 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 ADSSP30520 456 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 GPD2P43304 727 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 BNIP2Q12982 314 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 N4BP2L1Q5TBK1 243 aaPredicted RBP15.72■□□□□ 0.11
HCFC1-201ENST00000310441 TRMT11Q7Z4G4 463 aaKnown RBP15.72■□□□□ 0.11
HCFC1-201ENST00000310441 SIRT2Q8IXJ6 389 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 TRPV1Q8NER1 839 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 PLA2R1Q13018 1463 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 ICAM1P05362 532 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 SQLEQ14534 574 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 METTL6Q8TCB7 284 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 IGDCC4Q8TDY8 1250 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 FAM126AQ9BYI3 521 aaPredicted RBP15.72■□□□□ 0.11
HCFC1-201ENST00000310441 PRR12Q9ULL5 1215 aa15.72■□□□□ 0.11
HCFC1-201ENST00000310441 SUPT20HL2P0C7V6 817 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 PCSK9Q8NBP7 692 aaKnown RBP15.71■□□□□ 0.11
HCFC1-201ENST00000310441 ACOT12Q8WYK0 555 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 ZNF607Q96SK3 696 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 FICDQ9BVA6 458 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 RAPGEFL1Q9UHV5 662 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 NCKAP1Q9Y2A7 1128 aa15.71■□□□□ 0.11
HCFC1-201ENST00000310441 NDUFB10O96000 172 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms