RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 RDXP35241 583 aaKnown RBP20.07■□□□□ 0.8
LIME1-201ENST00000309546 SCNN1AP37088 669 aa20.07■□□□□ 0.8
LIME1-201ENST00000309546 GRIA4P48058 902 aa20.07■□□□□ 0.8
LIME1-201ENST00000309546 CDH4P55283 916 aa20.07■□□□□ 0.8
LIME1-201ENST00000309546 POLR2FP61218 127 aaKnown RBP20.07■□□□□ 0.8
LIME1-201ENST00000309546 NOMO3P69849 1222 aa20.07■□□□□ 0.8
LIME1-201ENST00000309546 SLC25A52Q3SY17 297 aa20.07■□□□□ 0.8
LIME1-201ENST00000309546 SASS6Q6UVJ0 657 aa20.07■□□□□ 0.8
LIME1-201ENST00000309546 AADATQ8N5Z0 425 aa20.07■□□□□ 0.8
LIME1-201ENST00000309546 PCMTD1Q96MG8 357 aaPredicted RBP20.07■□□□□ 0.8
LIME1-201ENST00000309546 FEM1AQ9BSK4 669 aa20.07■□□□□ 0.8
LIME1-201ENST00000309546 OSGEPQ9NPF4 335 aa20.07■□□□□ 0.8
LIME1-201ENST00000309546 TMPRSS4Q9NRS4 437 aa20.07■□□□□ 0.8
LIME1-201ENST00000309546 FANCLQ9NW38 375 aa20.07■□□□□ 0.8
LIME1-201ENST00000309546 EPG5Q9HCE0 2579 aa20.07■□□□□ 0.8
LIME1-201ENST00000309546 I6L893 689 aaPredicted RBP20.06■□□□□ 0.8
LIME1-201ENST00000309546 ZNF18P17022 549 aa20.06■□□□□ 0.8
LIME1-201ENST00000309546 C5AR1P21730 350 aa20.06■□□□□ 0.8
LIME1-201ENST00000309546 ALFQ53S48 1182 aa20.06■□□□□ 0.8
LIME1-201ENST00000309546 LRRC31Q6UY01 552 aa20.06■□□□□ 0.8
LIME1-201ENST00000309546 RBM43Q6ZSC3 357 aaKnown RBP20.06■□□□□ 0.8
LIME1-201ENST00000309546 OR2T34Q8NGX1 318 aa20.06■□□□□ 0.8
LIME1-201ENST00000309546 OR14C36Q8NHC7 312 aa20.06■□□□□ 0.8
LIME1-201ENST00000309546 FRS2Q8WU20 508 aa20.06■□□□□ 0.8
LIME1-201ENST00000309546 NT5C3BQ969T7 300 aa20.06■□□□□ 0.8
LIME1-201ENST00000309546 ALG14Q96F25 216 aa20.06■□□□□ 0.8
LIME1-201ENST00000309546 PGAP3Q96FM1 320 aaPredicted RBP20.06■□□□□ 0.8
LIME1-201ENST00000309546 CFAP57Q96MR6 1250 aa20.06■□□□□ 0.8
LIME1-201ENST00000309546 SLC6A18Q96N87 628 aa20.06■□□□□ 0.8
LIME1-201ENST00000309546 SPAG5Q96R06 1193 aa20.06■□□□□ 0.8
LIME1-201ENST00000309546 METTL5Q9NRN9 209 aaKnown RBP20.06■□□□□ 0.8
LIME1-201ENST00000309546 ADAMTS1Q9UHI8 967 aa20.06■□□□□ 0.8
LIME1-201ENST00000309546 KLK13Q9UKR3 277 aa20.06■□□□□ 0.8
LIME1-201ENST00000309546 ANKRD6Q9Y2G4 727 aa20.06■□□□□ 0.8
LIME1-201ENST00000309546 GOLGA6L22H0YM25 854 aa20.05■□□□□ 0.8
LIME1-201ENST00000309546 PLK4O00444 970 aa20.05■□□□□ 0.8
LIME1-201ENST00000309546 EPHB6O15197 1021 aa20.05■□□□□ 0.8
LIME1-201ENST00000309546 ZNF883P0CG24 379 aa20.05■□□□□ 0.8
LIME1-201ENST00000309546 GOT1P17174 413 aa20.05■□□□□ 0.8
LIME1-201ENST00000309546 METAP1P53582 386 aa20.05■□□□□ 0.8
LIME1-201ENST00000309546 ADPRHP54922 357 aa20.05■□□□□ 0.8
LIME1-201ENST00000309546 POM121L1PQ3SYA9 428 aa20.05■□□□□ 0.8
LIME1-201ENST00000309546 C5orf22Q49AR2 442 aa20.05■□□□□ 0.8
LIME1-201ENST00000309546 TRNP1Q6NT89 227 aa20.05■□□□□ 0.8
LIME1-201ENST00000309546 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.05■□□□□ 0.8
LIME1-201ENST00000309546 Q6ZVU0 165 aa20.05■□□□□ 0.8
LIME1-201ENST00000309546 TFAP2DQ7Z6R9 452 aa20.05■□□□□ 0.8
LIME1-201ENST00000309546 DSG4Q86SJ6 1040 aa20.05■□□□□ 0.8
LIME1-201ENST00000309546 OR8D1Q8WZ84 308 aa20.05■□□□□ 0.8
LIME1-201ENST00000309546 ORAI3Q9BRQ5 295 aa20.05■□□□□ 0.8
LIME1-201ENST00000309546 MPP6Q9NZW5 540 aa20.05■□□□□ 0.8
LIME1-201ENST00000309546 NOCTQ9UK39 431 aaKnown RBP20.05■□□□□ 0.8
LIME1-201ENST00000309546 PCOLCE2Q9UKZ9 415 aa20.05■□□□□ 0.8
LIME1-201ENST00000309546 TBC1D30Q9Y2I9 924 aa20.05■□□□□ 0.8
LIME1-201ENST00000309546 DOCK4Q8N1I0 1966 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 A0A1W2PPC4 97 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 KCNK3O14649 394 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 PROS1P07225 676 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 SOX5P35711 763 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 COPB1P53618 953 aaKnown RBP20.04■□□□□ 0.8
LIME1-201ENST00000309546 C21orf59P57076 290 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 DLG2Q15700 870 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 STX1AQ16623 288 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 ZNF423Q2M1K9 1284 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 PHLDB2Q86SQ0 1253 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 FAM131BQ86XD5 332 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 ZNF677Q86XU0 584 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 ZNF683Q8IZ20 524 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 CHCHD4Q8N4Q1 142 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 EMC1Q8N766 993 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 ANKRD20A12PQ8NF67 263 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 C11orf70Q9BRQ4 267 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 ACE2Q9BYF1 805 aaPredicted RBP20.04■□□□□ 0.8
LIME1-201ENST00000309546 AASDHPPTQ9NRN7 309 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 ANO10Q9NW15 660 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 TMEM59LQ9UK28 342 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 OR51B4Q9Y5P0 310 aa20.04■□□□□ 0.8
LIME1-201ENST00000309546 E9PAM4 449 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 ATP9BO43861 1147 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 SNAP91O60641 907 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 SRGAP2O75044 1071 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 TRIM16O95361 564 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 FTH1P19P0C7X4 201 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 DRD3P35462 400 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 JAM2P57087 298 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 RACK1P63244 317 aaKnown RBP20.03■□□□□ 0.8
LIME1-201ENST00000309546 KRT83P78385 493 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 ATP11AP98196 1134 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 IL9RQ01113 521 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 FMO1Q01740 532 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 CDR2Q01850 454 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 SYCP1Q15431 976 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 CDO1Q16878 200 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 KCNT1Q5JUK3 1230 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 SH2D3CQ8N5H7 860 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 PNPLA1Q8N8W4 532 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 PSMB7Q99436 277 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 C2orf49Q9BVC5 232 aaPredicted RBP20.03■□□□□ 0.8
LIME1-201ENST00000309546 EBF2Q9HAK2 575 aa20.03■□□□□ 0.8
LIME1-201ENST00000309546 SARDHQ9UL12 918 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms