RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 IRF2BP2Q7Z5L9 587 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 FAM131BQ86XD5 332 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 STK40Q8N2I9 435 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 MINDY1Q8N5J2 469 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 AADATQ8N5Z0 425 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 ANKRD20A12PQ8NF67 263 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 RXFP2Q8WXD0 754 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 HAPLN3Q96S86 360 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 BTBD1Q9H0C5 482 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 DNAAF2Q9NVR5 837 aaKnown RBP20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 MPP6Q9NZW5 540 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 SUSD2Q9UGT4 822 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 ADAMTS1Q9UHI8 967 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 ASPMQ8IZT6 3477 aa20.38■□□□□ 0.85
PDZRN3-202ENST00000308537 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 A0A1B0GTW7 788 aa20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 MEI4A8MW99 385 aa20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 UPK3BL1B0FP48 263 aa20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 UPK3BL2E5RIL1 263 aa20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 IGHV4-34P06331 123 aa20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 CDK11BP21127 795 aaKnown RBP20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 PTPN9P43378 593 aa20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 METAP1P53582 386 aa20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 OXCT1P55809 520 aa20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 GRIK2Q13002 908 aa20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 ZNF177Q13360 481 aaPredicted RBP20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 E4F1Q66K89 784 aaPredicted RBP20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 MMAAQ8IVH4 418 aaKnown RBP20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 MSANTD4Q8NCY6 345 aa20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 BIRC7Q96CA5 298 aa20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 MAGEB5Q9BZ81 275 aa20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 SGK2Q9HBY8 427 aa20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 TMEM51Q9NW97 253 aa20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 SCML1Q9UN30 329 aa20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 WASF3Q9UPY6 502 aa20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 HS3ST2Q9Y278 367 aa20.37■□□□□ 0.85
PDZRN3-202ENST00000308537 USP24Q9UPU5 2620 aa20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 A0A0D9SEW6 157 aa20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 E9PAM4 449 aa20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 SNAP91O60641 907 aa20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 MT-CO1P00395 513 aa20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 CD59P13987 128 aa20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 RFC1P35251 1148 aaPredicted RBP20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 DRD3P35462 400 aa20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 NOVA1P51513 510 aaKnown RBP20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 HDAC4P56524 1084 aa20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 ATP11AP98196 1134 aa20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 UAP1L1Q3KQV9 507 aa20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 TTC31Q49AM3 519 aaPredicted RBP20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 RNF219Q5W0B1 726 aaPredicted RBP20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 SH2D3CQ8N5H7 860 aa20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 NAP1L5Q96NT1 182 aaPredicted RBP20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 AGPAT1Q99943 283 aa20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 TTYH3Q9C0H2 523 aa20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 NEUROG2Q9H2A3 272 aa20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 EBF2Q9HAK2 575 aa20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 FBXL12Q9NXK8 326 aa20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 SARDHQ9UL12 918 aa20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 FRYQ5TBA9 3013 aa20.36■□□□□ 0.85
PDZRN3-202ENST00000308537 A0A1B0GTH6 734 aa20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 A0A1W2PP55 124 aa20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 BCAT2O15382 392 aaPredicted RBP20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 SRCP12931 536 aa20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 SLC8A1P32418 973 aa20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 GALCP54803 685 aa20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 NRG1Q02297 640 aaPredicted RBP20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 ELAVL3Q14576 367 aaKnown RBP20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 PPP1R15BQ5SWA1 713 aa20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 SND1Q7KZF4 910 aaKnown RBP eCLIP20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 SETD3Q86TU7 594 aaPredicted RBP20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 C3orf20Q8ND61 904 aa20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 DEFB124Q8NES8 71 aa20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 PCMTD1Q96MG8 357 aaPredicted RBP20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 GTPBP2Q9BX10 602 aaKnown RBP20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 OSGEPQ9NPF4 335 aa20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 ADAM22Q9P0K1 906 aa20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 VPS51Q9UID3 782 aa20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 VPS28Q9UK41 221 aa20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 PAXBP1Q9Y5B6 917 aa20.35■□□□□ 0.85
PDZRN3-202ENST00000308537 KMT2BQ9UMN6 2715 aaPredicted RBP20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 FAM72CH0Y354 149 aa20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 RNF103O00237 685 aa20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 ZMPSTE24O75844 475 aa20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 CEACAM1P13688 526 aa20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 GNSP15586 552 aa20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 ADRA1BP35368 520 aa20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 ZNF165P49910 485 aa20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 DLG2Q15700 870 aa20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 ACBD5Q5T8D3 534 aaPredicted RBP20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 FAM72AQ5TYM5 149 aa20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 FAM72DQ6L9T8 149 aa20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 WDR59Q6PJI9 974 aa20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 STRADAQ7RTN6 431 aa20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 TFAP2DQ7Z6R9 452 aa20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 FAM72BQ86X60 149 aa20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 NAT10Q9H0A0 1025 aaKnown RBP20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 MIR1-1HGQ9H1L0 117 aa20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 NDFIP2Q9NV92 336 aa20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 TAS2R14Q9NYV8 317 aa20.34■□□□□ 0.85
PDZRN3-202ENST00000308537 FZD4Q9ULV1 537 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms