RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 CHST9Q7L1S5 443 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 ANKS1AQ92625 1134 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 C17orf75Q9HAS0 396 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 POPDC2Q9HBU9 364 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 OR10H1Q9Y4A9 318 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 C1QTNF3-AMACRE9PGA6 284 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 TLR5O60602 858 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 MUTP22033 750 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 CCT8P50990 548 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 LBX1P52954 281 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 SLC6A3Q01959 620 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 EDRF1Q3B7T1 1238 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 KCNT2Q6UVM3 1135 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 SCAIQ8N9R8 606 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 TSC22D3Q99576 134 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 ALG9Q9H6U8 611 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 NMRK1Q9NWW6 199 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 SCN3BQ9NY72 215 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 A0A087X0B3 334 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 APODP05090 189 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 CCZ1BP86790 482 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 CCZ1P86791 482 aaPredicted RBP7.93□□□□□ -1.14
SCN9A-201ENST00000303354 CEP78Q5JTW2 689 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 C16orf62Q7Z3J2 963 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 REXO1L1PQ8IX06 675 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 PARP9Q8IXQ6 854 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 FBXO39Q8N4B4 442 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 OR5B17Q8NGF7 314 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 METTL6Q8TCB7 284 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 KIF2CQ99661 725 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 TMEM245Q9H330 911 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 CCDC167Q9P0B6 97 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 DNPEPQ9ULA0 475 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 COG5Q9UP83 839 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 ASF1AQ9Y294 204 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 H3BN98 237 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 AQP5P55064 265 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 ITGA9Q13797 1035 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 PDK2Q15119 407 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 SYDE1Q6ZW31 735 aaPredicted RBP7.93□□□□□ -1.14
SCN9A-201ENST00000303354 LRRC8DQ7L1W4 858 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 PAFAH2Q99487 392 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 GRIP2Q9C0E4 1043 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 USP31Q70CQ4 1352 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 A8MUA0 341 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 F8VZ95 297 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 RAD51BO15315 384 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 SLC25A14O95258 325 aaPredicted RBP7.93□□□□□ -1.14
SCN9A-201ENST00000303354 EIF4BP23588 611 aaKnown RBP7.93□□□□□ -1.14
SCN9A-201ENST00000303354 CLCNKBP51801 687 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 TGM3Q08188 693 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 CRHR2Q13324 411 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 MADCAM1Q13477 382 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 TAF8Q7Z7C8 310 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 LRRC34Q8IZ02 419 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 Q8N9G6 341 aaPredicted RBP7.93□□□□□ -1.14
SCN9A-201ENST00000303354 HTR3CQ8WXA8 447 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 RERGQ96A58 199 aaPredicted RBP7.93□□□□□ -1.14
SCN9A-201ENST00000303354 KCTD14Q9BQ13 255 aaPredicted RBP7.93□□□□□ -1.14
SCN9A-201ENST00000303354 CATSPERZQ9NTU4 200 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 DUS2Q9NX74 493 aaKnown RBP7.93□□□□□ -1.14
SCN9A-201ENST00000303354 PADI3Q9ULW8 664 aa7.93□□□□□ -1.14
SCN9A-201ENST00000303354 PXDNLA1KZ92 1463 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 SLC15A5A6NIM6 579 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 FAM25AB3EWG3 89 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 FAM25CB3EWG5 89 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 FAM25GB3EWG6 89 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 GTPBP1O00178 669 aaKnown RBP7.92□□□□□ -1.14
SCN9A-201ENST00000303354 HNRNPCP07910 306 aaKnown RBP eCLIP7.92□□□□□ -1.14
SCN9A-201ENST00000303354 SNRPD1P62314 119 aaKnown RBP7.92□□□□□ -1.14
SCN9A-201ENST00000303354 BIKQ13323 160 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 ATAT1Q5SQI0 421 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 OLFML2BQ68BL8 750 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 CYP2R1Q6VVX0 501 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 HEATR4Q86WZ0 1026 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 KCT2Q8NC54 265 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 MCOLN3Q8TDD5 553 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 SEC16BQ96JE7 1060 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 EPN3Q9H201 632 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 RIOX1Q9H6W3 641 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 CLIC5Q9NZA1 410 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 YDJCA8MPS7 323 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.92□□□□□ -1.14
SCN9A-201ENST00000303354 HDAC4P56524 1084 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 HYAL2Q12891 473 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 SEMA5AQ13591 1074 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 SF1Q15637 639 aaKnown RBP7.92□□□□□ -1.14
SCN9A-201ENST00000303354 LDB1Q86U70 411 aaPredicted RBP7.92□□□□□ -1.14
SCN9A-201ENST00000303354 MCOLN2Q8IZK6 566 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 ADCY4Q8NFM4 1077 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 DPEP3Q9H4B8 488 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 RAD21L1Q9H4I0 556 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 CDH9Q9ULB4 789 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 UNC13BO14795 1591 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 CNTNAP1P78357 1384 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 ADRB2P07550 413 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 CLTBP09497 229 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 ELK3P41970 407 aa7.92□□□□□ -1.14
SCN9A-201ENST00000303354 TMCO2Q7Z6W1 182 aaPredicted RBP7.92□□□□□ -1.14
SCN9A-201ENST00000303354 CDK20Q8IZL9 346 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms