RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 RNF103O00237 685 aa14.96□□□□□ -0.02
COL6A2-201ENST00000300527 COQ9O75208 318 aa14.96□□□□□ -0.02
COL6A2-201ENST00000300527 C2P06681 752 aa14.96□□□□□ -0.02
COL6A2-201ENST00000300527 HOXC6P09630 235 aa14.96□□□□□ -0.02
COL6A2-201ENST00000300527 MCF2P10911 925 aa14.96□□□□□ -0.02
COL6A2-201ENST00000300527 IFRD2Q12894 506 aaPredicted RBP14.96□□□□□ -0.02
COL6A2-201ENST00000300527 RNF135Q8IUD6 432 aa14.96□□□□□ -0.02
COL6A2-201ENST00000300527 ZBTB8OSQ8IWT0 167 aa14.96□□□□□ -0.02
COL6A2-201ENST00000300527 CYGBQ8WWM9 190 aa14.96□□□□□ -0.02
COL6A2-201ENST00000300527 FAM149B1Q96BN6 582 aa14.96□□□□□ -0.02
COL6A2-201ENST00000300527 CERS2Q96G23 380 aa14.96□□□□□ -0.02
COL6A2-201ENST00000300527 LHX5Q9H2C1 402 aa14.96□□□□□ -0.02
COL6A2-201ENST00000300527 ZDHHC2Q9UIJ5 367 aa14.96□□□□□ -0.02
COL6A2-201ENST00000300527 MRPL42Q9Y6G3 142 aaKnown RBP14.96□□□□□ -0.02
COL6A2-201ENST00000300527 WNK3Q9BYP7 1800 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 ADGRA2Q96PE1 1338 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 WDR46O15213 610 aaKnown RBP14.95□□□□□ -0.02
COL6A2-201ENST00000300527 HDAC3O15379 428 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 POLBP06746 335 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 VARSP26640 1264 aaKnown RBP14.95□□□□□ -0.02
COL6A2-201ENST00000300527 APOFQ13790 326 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 ZNF460Q14592 562 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 PDK2Q15119 407 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 FSTL4Q6MZW2 842 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 CHST15Q7LFX5 561 aaPredicted RBP14.95□□□□□ -0.02
COL6A2-201ENST00000300527 ACOT1Q86TX2 421 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 FAM110BQ8TC76 370 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 PLGRKTQ9HBL7 147 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 CYP4F12Q9HCS2 524 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 IARS2Q9NSE4 1012 aaKnown RBP14.95□□□□□ -0.02
COL6A2-201ENST00000300527 KLHL8Q9P2G9 620 aaPredicted RBP14.95□□□□□ -0.02
COL6A2-201ENST00000300527 PSMD12O00232 456 aaPredicted RBP14.95□□□□□ -0.02
COL6A2-201ENST00000300527 TFEBP19484 476 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 PPARGP37231 505 aaPredicted RBP14.95□□□□□ -0.02
COL6A2-201ENST00000300527 HSPA13P48723 471 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 TIFABQ6ZNK6 161 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 RPS27LQ71UM5 84 aaKnown RBP14.95□□□□□ -0.02
COL6A2-201ENST00000300527 HERC6Q8IVU3 1022 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 TP53INP2Q8IXH6 220 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 RDM1Q8NG50 284 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 ACMSDQ8TDX5 336 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 MFSD3Q96ES6 412 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 GGA3Q9NZ52 723 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 AP4E1Q9UPM8 1137 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 PCNTO95613 3336 aa14.95□□□□□ -0.02
COL6A2-201ENST00000300527 CROCCQ5TZA2 2017 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 TTC36A6NLP5 189 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 ARL2P36404 184 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 RPL14P50914 215 aaKnown RBP14.94□□□□□ -0.02
COL6A2-201ENST00000300527 PSME3P61289 254 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 NEDD8Q15843 81 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 PMF1Q6P1K2 205 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 LPGAT1Q92604 370 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 OSBPL6Q9BZF3 934 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 TRPC7Q9HCX4 862 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 TBC1D23Q9NUY8 699 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 SNX9Q9Y5X1 595 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 V9GYQ6 96 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 RNF103-CHMP3A0A140T963 221 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 TRIM43BA6NCK2 446 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 C9JVG2 144 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 E7ENX8 843 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 GNAO1P09471 354 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 HNRNPLP14866 589 aaKnown RBP eCLIP14.94□□□□□ -0.02
COL6A2-201ENST00000300527 ZNF23P17027 643 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 PGAM1P18669 254 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 SPRP35270 261 aaPredicted RBP14.94□□□□□ -0.02
COL6A2-201ENST00000300527 CDK9P50750 372 aaKnown RBP14.94□□□□□ -0.02
COL6A2-201ENST00000300527 IKBKEQ14164 716 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 PRPSAP1Q14558 356 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 C1orf127Q8N9H9 656 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 RP9Q8TA86 221 aaKnown RBP14.94□□□□□ -0.02
COL6A2-201ENST00000300527 NDRG1Q92597 394 aaKnown RBP14.94□□□□□ -0.02
COL6A2-201ENST00000300527 C12orf43Q96C57 262 aaKnown RBP14.94□□□□□ -0.02
COL6A2-201ENST00000300527 FCRL3Q96P31 734 aaPredicted RBP14.94□□□□□ -0.02
COL6A2-201ENST00000300527 ACE2Q9BYF1 805 aaPredicted RBP14.94□□□□□ -0.02
COL6A2-201ENST00000300527 A0A1W2PPW3 197 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 FAM189A1O60320 539 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 AP3M2P53677 418 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 NIPAL4Q0D2K0 466 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 AGKQ53H12 422 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 OFCC1Q8IZS5 231 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 PGAM4Q8N0Y7 254 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 URGCPQ8TCY9 931 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 KCTD4Q8WVF5 259 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 PLK2Q9NYY3 685 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 DTLQ9NZJ0 730 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 SIX4Q9UIU6 781 aa14.94□□□□□ -0.02
COL6A2-201ENST00000300527 RUVBL2Q9Y230 463 aaKnown RBP14.94□□□□□ -0.02
COL6A2-201ENST00000300527 SIPA1L1O43166 1804 aa14.93□□□□□ -0.02
COL6A2-201ENST00000300527 OCM2P0CE71 109 aa14.93□□□□□ -0.02
COL6A2-201ENST00000300527 OCMP0CE72 109 aaPredicted RBP14.93□□□□□ -0.02
COL6A2-201ENST00000300527 CYP3A5P20815 502 aa14.93□□□□□ -0.02
COL6A2-201ENST00000300527 ADORA2BP29275 332 aa14.93□□□□□ -0.02
COL6A2-201ENST00000300527 YAP1P46937 504 aaKnown RBP14.93□□□□□ -0.02
COL6A2-201ENST00000300527 SULT2A1Q06520 285 aa14.93□□□□□ -0.02
COL6A2-201ENST00000300527 USP10Q14694 798 aaKnown RBP14.93□□□□□ -0.02
COL6A2-201ENST00000300527 ATF7IP2Q5U623 682 aa14.93□□□□□ -0.02
COL6A2-201ENST00000300527 JADE1Q6IE81 842 aa14.93□□□□□ -0.02
COL6A2-201ENST00000300527 STYK1Q6J9G0 422 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms