RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 STIP1P31948 543 aaKnown RBP13.18□□□□□ -0.3
ZIC3-201ENST00000287538 NOS2P35228 1153 aa13.18□□□□□ -0.3
ZIC3-201ENST00000287538 ABCG1P45844 678 aa13.18□□□□□ -0.3
ZIC3-201ENST00000287538 SH3BGRP55822 239 aaPredicted RBP13.18□□□□□ -0.3
ZIC3-201ENST00000287538 ACAP1Q15027 740 aa13.18□□□□□ -0.3
ZIC3-201ENST00000287538 SLC25A52Q3SY17 297 aa13.18□□□□□ -0.3
ZIC3-201ENST00000287538 PPP2R3CQ969Q6 453 aa13.18□□□□□ -0.3
ZIC3-201ENST00000287538 SLC17A6Q9P2U8 582 aa13.18□□□□□ -0.3
ZIC3-201ENST00000287538 TPH1P17752 444 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 PHBP35232 272 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 TUSC3Q13454 348 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 MGAT5BQ3V5L5 792 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 KBTBD12Q3ZCT8 623 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 ATP11CQ8NB49 1132 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 DTLQ9NZJ0 730 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 B2RBV5 119 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 H3BRJ5 948 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 CIB2O75838 187 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 ERCC2P18074 760 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 C6orf163Q5TEZ5 329 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 RTN4RL1Q86UN2 441 aaPredicted RBP13.17□□□□□ -0.3
ZIC3-201ENST00000287538 ZNF398Q8TD17 642 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 SNRNP27Q8WVK2 155 aaKnown RBP13.17□□□□□ -0.3
ZIC3-201ENST00000287538 TFB1MQ8WVM0 346 aaKnown RBP13.17□□□□□ -0.3
ZIC3-201ENST00000287538 SMARCD1Q96GM5 515 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 CLPTM1LQ96KA5 538 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 TTC25Q96NG3 672 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 PAFAH2Q99487 392 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 TMEM120AQ9BXJ8 343 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 RNF208Q9H0X6 261 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 HSFX1Q9UBD0 423 aa13.17□□□□□ -0.3
ZIC3-201ENST00000287538 CCDC160A6NGH7 325 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 GOLGA8TH3BQL2 631 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 TBX18O95935 607 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 PABPC4LP0CB38 370 aaKnown RBP13.16□□□□□ -0.3
ZIC3-201ENST00000287538 RPL17P18621 184 aaKnown RBP13.16□□□□□ -0.3
ZIC3-201ENST00000287538 LRPAP1P30533 357 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 PGFP49763 221 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 GPX6P59796 221 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 AP2B1P63010 937 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 SFSWAPQ12872 951 aaKnown RBP13.16□□□□□ -0.3
ZIC3-201ENST00000287538 TMED1Q13445 227 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 RIPOR1Q6ZS17 1223 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 PCGF5Q86SE9 256 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 RASSF3Q86WH2 238 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 LRRC6Q86X45 466 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 MPP5Q8N3R9 675 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 SLC25A41Q8N5S1 370 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 TTC9BQ8N6N2 239 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 COLGALT1Q8NBJ5 622 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 ARHGEF4Q9NR80 690 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 SHOC2Q9UQ13 582 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 PTCH2Q9Y6C5 1203 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 GRIA2P42262 883 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 DAOAP59103 153 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 ITKQ08881 620 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 TFAP2DQ7Z6R9 452 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 GIPC2Q8TF65 315 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 ZNF296Q8WUU4 475 aaPredicted RBP13.16□□□□□ -0.3
ZIC3-201ENST00000287538 RSPH1Q8WYR4 309 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 ATXN3LQ9H3M9 355 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 ANLNQ9NQW6 1124 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 CHST12Q9NRB3 414 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 PAK5Q9P286 719 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 OR12D3Q9UGF7 316 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 GMEB1Q9Y692 573 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 A0A1W2PQ45 241 aaPredicted RBP13.16□□□□□ -0.3
ZIC3-201ENST00000287538 A0A1W2PQY0 241 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 RNF103O00237 685 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 UGT1A9O60656 530 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 MT-ND3P03897 115 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 HNRNPCP07910 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
ZIC3-201ENST00000287538 MROH9Q5TGP6 573 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 PRPF39Q86UA1 669 aaKnown RBP13.16□□□□□ -0.3
ZIC3-201ENST00000287538 CDKL3Q8IVW4 592 aaPredicted RBP13.16□□□□□ -0.3
ZIC3-201ENST00000287538 URGCPQ8TCY9 931 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 TTC17Q96AE7 1141 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 NACA2Q9H009 215 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 IQCGQ9H095 443 aaKnown RBP13.16□□□□□ -0.3
ZIC3-201ENST00000287538 UGT1A7Q9HAW7 530 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 UGT1A10Q9HAW8 530 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 UGT1A8Q9HAW9 530 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 CDH9Q9ULB4 789 aa13.16□□□□□ -0.3
ZIC3-201ENST00000287538 PGM3O95394 542 aa13.15□□□□□ -0.3
ZIC3-201ENST00000287538 PSMB4P28070 264 aa13.15□□□□□ -0.3
ZIC3-201ENST00000287538 ADRA1BP35368 520 aa13.15□□□□□ -0.3
ZIC3-201ENST00000287538 CDK16Q00536 496 aa13.15□□□□□ -0.3
ZIC3-201ENST00000287538 MBTPS1Q14703 1052 aa13.15□□□□□ -0.3
ZIC3-201ENST00000287538 ARL13BQ3SXY8 428 aa13.15□□□□□ -0.3
ZIC3-201ENST00000287538 CTXN3Q4LDR2 81 aa13.15□□□□□ -0.3
ZIC3-201ENST00000287538 NOMO2Q5JPE7 1267 aa13.15□□□□□ -0.3
ZIC3-201ENST00000287538 RAPH1Q70E73 1250 aa13.15□□□□□ -0.3
ZIC3-201ENST00000287538 ZDHHC17Q8IUH5 632 aa13.15□□□□□ -0.3
ZIC3-201ENST00000287538 HTR3CQ8WXA8 447 aa13.15□□□□□ -0.3
ZIC3-201ENST00000287538 PHACTR1Q9C0D0 580 aa13.15□□□□□ -0.3
ZIC3-201ENST00000287538 USP29Q9HBJ7 922 aa13.15□□□□□ -0.3
ZIC3-201ENST00000287538 MPP6Q9NZW5 540 aa13.15□□□□□ -0.3
ZIC3-201ENST00000287538 SENP1Q9P0U3 644 aa13.15□□□□□ -0.3
ZIC3-201ENST00000287538 PPM1HQ9ULR3 514 aa13.15□□□□□ -0.3
ZIC3-201ENST00000287538 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms