RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 BHLHE22Q8NFJ8 381 aaPredicted RBP11.6□□□□□ -0.55
SCLT1-201ENST00000281142 MCRS1Q96EZ8 462 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 KLHL32Q96NJ5 620 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 KCNK16Q96T55 309 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 MRPS26Q9BYN8 205 aaKnown RBP11.6□□□□□ -0.55
SCLT1-201ENST00000281142 ASNSD1Q9NWL6 643 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 DMTF1Q9Y222 760 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 CEPT1Q9Y6K0 416 aa11.6□□□□□ -0.55
SCLT1-201ENST00000281142 H0YCG3 227 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 GLRA3O75311 464 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 ZNF865P0CJ78 1059 aaPredicted RBP11.59□□□□□ -0.55
SCLT1-201ENST00000281142 HSPA1AP0DMV8 641 aaKnown RBP11.59□□□□□ -0.55
SCLT1-201ENST00000281142 HSPA1BP0DMV9 641 aaKnown RBP11.59□□□□□ -0.55
SCLT1-201ENST00000281142 ERVK-10P10266 1014 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 HSPA8P11142 646 aaKnown RBP11.59□□□□□ -0.55
SCLT1-201ENST00000281142 GPD1P21695 349 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 EPHA3P29320 983 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 ZNF143P52747 638 aaPredicted RBP11.59□□□□□ -0.55
SCLT1-201ENST00000281142 DCTN2Q13561 401 aaKnown RBP11.59□□□□□ -0.55
SCLT1-201ENST00000281142 APOFQ13790 326 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 CEACAM7Q14002 265 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 FLOT2Q14254 428 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 XKR3Q5GH77 459 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 GJC2Q5T442 439 aaPredicted RBP11.59□□□□□ -0.55
SCLT1-201ENST00000281142 KLHL35Q6PF15 583 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 TIFABQ6ZNK6 161 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 TRIM67Q6ZTA4 783 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 FAM183BPQ6ZVS7 135 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 TRPV1Q8NER1 839 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 RDM1Q8NG50 284 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 ZSCAN18Q8TBC5 510 aaPredicted RBP11.59□□□□□ -0.55
SCLT1-201ENST00000281142 COPS5Q92905 334 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 RTP4Q96DX8 246 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 CCDC97Q96F63 343 aaPredicted RBP11.59□□□□□ -0.55
SCLT1-201ENST00000281142 CDHR1Q96JP9 859 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 SIKE1Q9BRV8 207 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 MTMR10Q9NXD2 777 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 XPO1O14980 1071 aaKnown RBP11.59□□□□□ -0.55
SCLT1-201ENST00000281142 CSDE1O75534 798 aaKnown RBP11.59□□□□□ -0.55
SCLT1-201ENST00000281142 TRMUO75648 421 aaKnown RBP11.59□□□□□ -0.55
SCLT1-201ENST00000281142 CHRNGP07510 517 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 ENO3P13929 434 aaPredicted RBP11.59□□□□□ -0.55
SCLT1-201ENST00000281142 CYP3A5P20815 502 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 FGFR3P22607 806 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 PIK3R1P27986 724 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 STT3AP46977 705 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 SERPINB9P50453 376 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 DLG2Q15700 870 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 SLC44A4Q53GD3 710 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 TICAM1Q8IUC6 712 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 RAET1EQ8TD07 263 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 RCN3Q96D15 328 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 LHX5Q9H2C1 402 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 SEMA6AQ9H2E6 1030 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 DHX33Q9H6R0 707 aaKnown RBP11.59□□□□□ -0.55
SCLT1-201ENST00000281142 C6orf203Q9P0P8 240 aaPredicted RBP11.59□□□□□ -0.55
SCLT1-201ENST00000281142 STK39Q9UEW8 545 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 ZNF711Q9Y462 761 aa11.59□□□□□ -0.55
SCLT1-201ENST00000281142 C2CD4BA6NLJ0 364 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 NOP56O00567 594 aaKnown RBP11.58□□□□□ -0.55
SCLT1-201ENST00000281142 FOXD2O60548 495 aaPredicted RBP11.58□□□□□ -0.55
SCLT1-201ENST00000281142 TNFAIP8O95379 198 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 LTFP02788 710 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 FAM58BPP0C7Q3 252 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 SUPT20HL2P0C7V6 817 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 TXNP10599 105 aaKnown RBP11.58□□□□□ -0.55
SCLT1-201ENST00000281142 TGFB3P10600 412 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 ALOX15P16050 662 aaPredicted RBP11.58□□□□□ -0.55
SCLT1-201ENST00000281142 CDH2P19022 906 aaPredicted RBP11.58□□□□□ -0.55
SCLT1-201ENST00000281142 MGAT1P26572 445 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 MLH1P40692 756 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 IRF9Q00978 393 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 NIPAL4Q0D2K0 466 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 PPP2R5DQ14738 602 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 STILQ15468 1287 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 FAM47CQ5HY64 1035 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 RARS2Q5T160 578 aaKnown RBP11.58□□□□□ -0.55
SCLT1-201ENST00000281142 EPGNQ6UW88 154 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 DSELQ8IZU8 1212 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 AHI1Q8N157 1196 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 KBTBD7Q8WVZ9 684 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 ACO2Q99798 780 aaKnown RBP11.58□□□□□ -0.55
SCLT1-201ENST00000281142 RTKNQ9BST9 563 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 SNRNP25Q9BV90 132 aaKnown RBP11.58□□□□□ -0.55
SCLT1-201ENST00000281142 ZNF696Q9H7X3 374 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 CAB39LQ9H9S4 337 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 TIMMDC1Q9NPL8 285 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 PTCH2Q9Y6C5 1203 aa11.58□□□□□ -0.55
SCLT1-201ENST00000281142 MPSTP25325 297 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 GPD2P43304 727 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 HARS2P49590 506 aaKnown RBP11.58□□□□□ -0.56
SCLT1-201ENST00000281142 LBX1P52954 281 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 PPIDQ08752 370 aaKnown RBP11.58□□□□□ -0.56
SCLT1-201ENST00000281142 ZNF423Q2M1K9 1284 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 CCDC14Q49A88 953 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 LRRC8BQ6P9F7 803 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 CPNE9Q8IYJ1 553 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 CORO1BQ9BR76 489 aa11.58□□□□□ -0.56
SCLT1-201ENST00000281142 STN1Q9H668 368 aaKnown RBP11.58□□□□□ -0.56
SCLT1-201ENST00000281142 RAB26Q9ULW5 256 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms