RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 SLC8B1Q6J4K2 584 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 CNKSR3Q6P9H4 555 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 MARK2Q7KZI7 788 aaKnown RBP9.8□□□□□ -0.84
TRIM55-201ENST00000276573 RNF168Q8IYW5 571 aaPredicted RBP9.8□□□□□ -0.84
TRIM55-201ENST00000276573 UNC5BQ8IZJ1 945 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 ANKS4BQ8N8V4 417 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 USP33Q8TEY7 942 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 IGSF21Q96ID5 467 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 BTN2A3PQ96KV6 586 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 FCRL3Q96P31 734 aaPredicted RBP9.8□□□□□ -0.84
TRIM55-201ENST00000276573 TTLL2Q9BWV7 592 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 NOL6Q9H6R4 1146 aaKnown RBP9.8□□□□□ -0.84
TRIM55-201ENST00000276573 LRRC40Q9H9A6 602 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 GLOD4Q9HC38 313 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 PRDM5Q9NQX1 630 aaPredicted RBP9.8□□□□□ -0.84
TRIM55-201ENST00000276573 BFARQ9NZS9 450 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 SLC17A7Q9P2U7 560 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 PPARGC1AQ9UBK2 798 aaKnown RBP9.8□□□□□ -0.84
TRIM55-201ENST00000276573 TBX21Q9UL17 535 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 VANGL2Q9ULK5 521 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 USP15Q9Y4E8 981 aaPredicted RBP9.8□□□□□ -0.84
TRIM55-201ENST00000276573 BACE2Q9Y5Z0 518 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 MYO16Q9Y6X6 1858 aa9.8□□□□□ -0.84
TRIM55-201ENST00000276573 IGLV3-10A0A075B6K4 115 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 SLC12A8A0AV02 714 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 MAGEB16A2A368 324 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 HMX2A2RU54 273 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 CCT8L1PA6NM43 557 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 DRGXA6NNA5 263 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 LPXNO60711 386 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 IGLV3-27P01718 113 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 ADRA1DP25100 572 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 OR1D2P34982 312 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 TUFMP49411 452 aaKnown RBP9.79□□□□□ -0.84
TRIM55-201ENST00000276573 PAPOLAP51003 745 aaKnown RBP9.79□□□□□ -0.84
TRIM55-201ENST00000276573 NDST2P52849 883 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 MGAT5Q09328 741 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 NIPAL4Q0D2K0 466 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 NAB1Q13506 487 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 PSMD5Q16401 504 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 TIFABQ6ZNK6 161 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 CCDC121Q6ZUS5 278 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 MIB1Q86YT6 1006 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 UMODL1-AS1Q8N2C9 162 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 ZNF276Q8N554 614 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 DNAAF3Q8N9W5 541 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 ZNF75CPQ92670 426 aaPredicted RBP9.79□□□□□ -0.84
TRIM55-201ENST00000276573 CDKL2Q92772 493 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 GRAMD1AQ96CP6 724 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 APOPT1Q96IL0 206 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 CEP295NLQ96MC4 621 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 FCRL5Q96RD9 977 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 VN1R3Q9BXE9 311 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 PITPNM3Q9BZ71 974 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 ZYG11BQ9C0D3 744 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 VPS11Q9H270 941 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 C12orf65Q9H3J6 166 aaKnown RBP9.79□□□□□ -0.84
TRIM55-201ENST00000276573 TMEM39AQ9NV64 488 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 AAR2Q9Y312 384 aaKnown RBP9.79□□□□□ -0.84
TRIM55-201ENST00000276573 MRPL42Q9Y6G3 142 aaKnown RBP9.79□□□□□ -0.84
TRIM55-201ENST00000276573 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.79□□□□□ -0.84
TRIM55-201ENST00000276573 AP3B1O00203 1094 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 HMBSP08397 361 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 DHRS4L1P0CG22 281 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 ALADP13716 330 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 RPL17P18621 184 aaKnown RBP9.79□□□□□ -0.84
TRIM55-201ENST00000276573 ATF6P18850 670 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 CNTFP26441 200 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 ETV4P43268 484 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 RING1Q06587 406 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 DNAJC3Q13217 504 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 BMPR2Q13873 1038 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 FRG1Q14331 258 aaKnown RBP9.79□□□□□ -0.84
TRIM55-201ENST00000276573 ZKSCAN8Q15776 578 aaPredicted RBP9.79□□□□□ -0.84
TRIM55-201ENST00000276573 CERCAMQ5T4B2 595 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 ACBD5Q5T8D3 534 aaPredicted RBP9.79□□□□□ -0.84
TRIM55-201ENST00000276573 TIGD7Q6NT04 549 aaPredicted RBP9.79□□□□□ -0.84
TRIM55-201ENST00000276573 CGB2Q6NT52 195 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 ZNF449Q6P9G9 518 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 CES3Q6UWW8 571 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 SPATA21Q7Z572 469 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 LINC00523Q86TU6 105 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 TMEM135Q86UB9 458 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 LRRC8CQ8TDW0 803 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 CCT6BQ92526 530 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 TOP1MTQ969P6 601 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 CLSTN3Q9BQT9 956 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 KDM4CQ9H3R0 1056 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 CCSER2Q9H7U1 834 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 RBM22Q9NW64 420 aaKnown RBP eCLIP9.79□□□□□ -0.84
TRIM55-201ENST00000276573 TMEM248Q9NWD8 314 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 DONSONQ9NYP3 566 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 UBP1Q9NZI7 540 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 PRKAG3Q9UGI9 489 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 MAGED2Q9UNF1 606 aaPredicted RBP9.79□□□□□ -0.84
TRIM55-201ENST00000276573 ATP11BQ9Y2G3 1177 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 RPS6KL1Q9Y6S9 549 aa9.79□□□□□ -0.84
TRIM55-201ENST00000276573 TANC1Q9C0D5 1861 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 FAM237BA0A1B0GVD1 139 aa9.78□□□□□ -0.84
TRIM55-201ENST00000276573 WDR91A4D1P6 747 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms