RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 CLOCKO15516 846 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 NBNO60934 754 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 RTN3O95197 1032 aaPredicted RBP11.65□□□□□ -0.54
USP53-201ENST00000274030 GPR15P49685 360 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 SERPINH1P50454 418 aaKnown RBP11.65□□□□□ -0.54
USP53-201ENST00000274030 CACNA2D1P54289 1103 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 NAGLUP54802 743 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 SETMARQ53H47 684 aaPredicted RBP11.65□□□□□ -0.54
USP53-201ENST00000274030 CCDC92Q53HC0 331 aaPredicted RBP11.65□□□□□ -0.54
USP53-201ENST00000274030 EPHX4Q8IUS5 362 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 OR6Y1Q8NGX8 325 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 IL31RAQ8NI17 732 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 POLR1EQ9GZS1 481 aaKnown RBP11.65□□□□□ -0.54
USP53-201ENST00000274030 KLQ9UEF7 1012 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 MANSC4A6NHS7 340 aaPredicted RBP11.65□□□□□ -0.54
USP53-201ENST00000274030 MEIS2O14770 477 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 PRKAG1P54619 331 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 EIF2B5Q13144 721 aaKnown RBP11.65□□□□□ -0.54
USP53-201ENST00000274030 UNC5AQ6ZN44 842 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 HDDC2Q7Z4H3 204 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 VSIG10LQ86VR7 867 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 SPATA6LQ8N4H0 392 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 ZCCHC9Q8N567 271 aaKnown RBP11.65□□□□□ -0.54
USP53-201ENST00000274030 UXS1Q8NBZ7 420 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 AENQ8WTP8 325 aaKnown RBP11.65□□□□□ -0.54
USP53-201ENST00000274030 PYDC1Q8WXC3 89 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 RNFT2Q96EX2 444 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 EXOC2Q96KP1 924 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 NDNQ99608 321 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 HMX1Q9NP08 348 aaPredicted RBP11.65□□□□□ -0.54
USP53-201ENST00000274030 GDF3Q9NR23 364 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 STMN3Q9NZ72 180 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 SLC27A5Q9Y2P5 690 aa11.65□□□□□ -0.54
USP53-201ENST00000274030 ZBTB14O43829 449 aa11.65□□□□□ -0.55
USP53-201ENST00000274030 PSMD10O75832 226 aa11.65□□□□□ -0.55
USP53-201ENST00000274030 GRK4P32298 578 aa11.65□□□□□ -0.55
USP53-201ENST00000274030 CCL23P55773 120 aa11.65□□□□□ -0.55
USP53-201ENST00000274030 GRIK3Q13003 919 aa11.65□□□□□ -0.55
USP53-201ENST00000274030 CELF3Q5SZQ8 465 aaKnown RBP11.65□□□□□ -0.55
USP53-201ENST00000274030 FBXL19Q6PCT2 694 aa11.65□□□□□ -0.55
USP53-201ENST00000274030 KATNAL2Q8IYT4 538 aa11.65□□□□□ -0.55
USP53-201ENST00000274030 C12orf29Q8N999 325 aa11.65□□□□□ -0.55
USP53-201ENST00000274030 KLHL25Q9H0H3 589 aa11.65□□□□□ -0.55
USP53-201ENST00000274030 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.65□□□□□ -0.55
USP53-201ENST00000274030 OPTCQ9UBM4 332 aa11.65□□□□□ -0.55
USP53-201ENST00000274030 TBC1D3BA6NDS4 549 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 RPLP2P05387 115 aaKnown RBP11.64□□□□□ -0.55
USP53-201ENST00000274030 FYNP06241 537 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 FAM58BPP0C7Q3 252 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 AXLP30530 894 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 NOS2P35228 1153 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 ABL2P42684 1182 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 TUFMP49411 452 aaKnown RBP11.64□□□□□ -0.55
USP53-201ENST00000274030 XRCC4Q13426 336 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 MEA1Q16626 185 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 SCIMPQ6UWF3 145 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 MACC1Q6ZN28 852 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 WDR36Q8NI36 951 aaKnown RBP11.64□□□□□ -0.55
USP53-201ENST00000274030 GPR152Q8TDT2 470 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 OMDQ99983 421 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 ATP6V1HQ9UI12 483 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 LDLRP01130 860 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 FCGR1AP12314 374 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 CCR4P51679 360 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 MRPS22P82650 360 aaKnown RBP11.64□□□□□ -0.55
USP53-201ENST00000274030 MAPK11Q15759 364 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 FAM45BPQ6NSW5 357 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 SYT12Q8IV01 421 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 GPC2Q8N158 579 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 OR5B17Q8NGF7 314 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 LNX1Q8TBB1 728 aaPredicted RBP11.64□□□□□ -0.55
USP53-201ENST00000274030 COL26A1Q96A83 441 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 BDH2Q9BUT1 245 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 RSPH9Q9H1X1 276 aaPredicted RBP11.64□□□□□ -0.55
USP53-201ENST00000274030 ABCC13Q9NSE7 274 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 CATSPERZQ9NTU4 200 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 THG1LQ9NWX6 298 aaKnown RBP11.64□□□□□ -0.55
USP53-201ENST00000274030 VTI1BQ9UEU0 232 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 CLDN5O00501 218 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 B4GALT5O43286 388 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 CYP1A1P04798 512 aaPredicted RBP11.64□□□□□ -0.55
USP53-201ENST00000274030 CCDC166P0CW27 439 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 MAXP61244 160 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 CSNK2BP67870 215 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 C1DQ13901 141 aaKnown RBP11.64□□□□□ -0.55
USP53-201ENST00000274030 IQSEC1Q6DN90 963 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 LPCAT2Q7L5N7 544 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 CDK20Q8IZL9 346 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 EID3Q8N140 333 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 SNRNP25Q9BV90 132 aaKnown RBP11.64□□□□□ -0.55
USP53-201ENST00000274030 KLHL1Q9NR64 748 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 DDX18Q9NVP1 670 aaKnown RBP11.64□□□□□ -0.55
USP53-201ENST00000274030 RAB21Q9UL25 225 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 ASTN1O14525 1302 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 FAM237BA0A1B0GVD1 139 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 ME2P23368 584 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 ATP5C1P36542 298 aaKnown RBP11.64□□□□□ -0.55
USP53-201ENST00000274030 NRF1Q16656 503 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 DDR2Q16832 855 aa11.64□□□□□ -0.55
USP53-201ENST00000274030 PARP6Q2NL67 630 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms