RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 MID1O15344 667 aa16.52■□□□□ 0.24
USE1-201ENST00000263897 VAV1P15498 845 aa16.52■□□□□ 0.24
USE1-201ENST00000263897 RDXP35241 583 aaKnown RBP16.52■□□□□ 0.24
USE1-201ENST00000263897 ATP11AP98196 1134 aa16.52■□□□□ 0.24
USE1-201ENST00000263897 PTP4A2Q12974 167 aa16.52■□□□□ 0.24
USE1-201ENST00000263897 ARTNQ5T4W7 220 aa16.52■□□□□ 0.24
USE1-201ENST00000263897 PIP4P1Q86T03 277 aa16.52■□□□□ 0.24
USE1-201ENST00000263897 RXFP2Q8WXD0 754 aa16.52■□□□□ 0.24
USE1-201ENST00000263897 BIRC7Q96CA5 298 aa16.52■□□□□ 0.24
USE1-201ENST00000263897 C11orf70Q9BRQ4 267 aa16.52■□□□□ 0.24
USE1-201ENST00000263897 NEUROG2Q9H2A3 272 aa16.52■□□□□ 0.24
USE1-201ENST00000263897 VPS28Q9UK41 221 aa16.52■□□□□ 0.24
USE1-201ENST00000263897 E9PAM4 449 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 TEX33O43247 280 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 ATP9BO43861 1147 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 GJB3O75712 270 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 C5AR1P21730 350 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 PMLP29590 882 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 NSFP46459 744 aaKnown RBP16.51■□□□□ 0.23
USE1-201ENST00000263897 GALCP54803 685 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 GRIK2Q13002 908 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 SLC14A1Q13336 389 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 ELAVL3Q14576 367 aaKnown RBP16.51■□□□□ 0.23
USE1-201ENST00000263897 CLEC16AQ2KHT3 1053 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 CCDC14Q49A88 953 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 ACCSLQ4AC99 568 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 CAVIN1Q6NZI2 390 aaKnown RBP16.51■□□□□ 0.23
USE1-201ENST00000263897 LRSAM1Q6UWE0 723 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 SETD3Q86TU7 594 aaPredicted RBP16.51■□□□□ 0.23
USE1-201ENST00000263897 FAM131BQ86XD5 332 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 PHF13Q86YI8 300 aaPredicted RBP16.51■□□□□ 0.23
USE1-201ENST00000263897 DEFB124Q8NES8 71 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 JOSD2Q8TAC2 188 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 SNX19Q92543 992 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 AGPAT1Q99943 283 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 OMDQ99983 421 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 MUC3BQ9H195 1237 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 SLC32A1Q9H598 525 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 OSGEPQ9NPF4 335 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 RTN4Q9NQC3 1192 aaKnown RBP16.51■□□□□ 0.23
USE1-201ENST00000263897 MPP6Q9NZW5 540 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 ADAM22Q9P0K1 906 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 SERGEFQ9UGK8 458 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 ADAMTS1Q9UHI8 967 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 SLC25A13Q9UJS0 675 aa16.51■□□□□ 0.23
USE1-201ENST00000263897 A0A1W2PP55 124 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 C2CD4BA6NLJ0 364 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 SRGAP2O75044 1071 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 RNASEH2AO75792 299 aaKnown RBP16.5■□□□□ 0.23
USE1-201ENST00000263897 FSBPO95073 299 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 ADH1BP00325 375 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 IL1BP01584 269 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 RHOCP08134 193 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 KRT3P12035 628 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 CD59P13987 128 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 GOT1P17174 413 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 CD27P26842 260 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 SDC4P31431 198 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 ADRA1BP35368 520 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 PTPN9P43378 593 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 CSNK1EP49674 416 aaKnown RBP16.5■□□□□ 0.23
USE1-201ENST00000263897 KRT83P78385 493 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 BNC1Q01954 994 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 DLG2Q15700 870 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 C15orf59Q2T9L4 293 aaPredicted RBP16.5■□□□□ 0.23
USE1-201ENST00000263897 RAB6CQ53S08 254 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 KIAA0895LQ68EN5 471 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 AADATQ8N5Z0 425 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 CENPIQ92674 756 aaPredicted RBP16.5■□□□□ 0.23
USE1-201ENST00000263897 PSMB7Q99436 277 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 RAB6CQ9H0N0 254 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 FZD4Q9ULV1 537 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 SLCO1B1Q9Y6L6 691 aa16.5■□□□□ 0.23
USE1-201ENST00000263897 FAM47DPA6NHR8 397 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 LRRC72A6NJI9 287 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 MCF2LO15068 1137 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 GJB6O95452 261 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 MT-CO1P00395 513 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 CALB1P05937 261 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 IGHV4-34P06331 123 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 CCDC172P0C7W6 258 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 FERP16591 822 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 OR1E1P30953 314 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 RFC1P35251 1148 aaPredicted RBP16.49■□□□□ 0.23
USE1-201ENST00000263897 PSMD8P48556 350 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 ZNF165P49910 485 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 AFF3P51826 1226 aaKnown RBP16.49■□□□□ 0.23
USE1-201ENST00000263897 GSCP56915 257 aaPredicted RBP16.49■□□□□ 0.23
USE1-201ENST00000263897 ARL13BQ3SXY8 428 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 C6orf118Q5T5N4 469 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 NCEH1Q6PIU2 408 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 STRADAQ7RTN6 431 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 IRF2BP2Q7Z5L9 587 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 TFAP2DQ7Z6R9 452 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 DSG4Q86SJ6 1040 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 SH2D3CQ8N5H7 860 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 CNTNAP3BQ96NU0 1288 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 ORAI3Q9BRQ5 295 aa16.49■□□□□ 0.23
USE1-201ENST00000263897 C2orf49Q9BVC5 232 aaPredicted RBP16.49■□□□□ 0.23
USE1-201ENST00000263897 CNTNAP3Q9BZ76 1288 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms