RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 LRRC6Q86X45 466 aa28.3■■■□□ 2.12
CCM2-201ENST00000258781 KLHL23Q8NBE8 558 aa28.3■■■□□ 2.12
CCM2-201ENST00000258781 HSFX1Q9UBD0 423 aa28.3■■■□□ 2.12
CCM2-201ENST00000258781 PPARGC1AQ9UBK2 798 aaKnown RBP28.3■■■□□ 2.12
CCM2-201ENST00000258781 A0A1W2PPM1 405 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 GRXCR1A8MXD5 290 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 PIAS1O75925 651 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 RING1Q06587 406 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 LRRC14Q15048 493 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 KCTD11Q693B1 232 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 ZNF276Q8N554 614 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 GIPC2Q8TF65 315 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 CKAP2Q8WWK9 683 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 AGAP3Q96P47 875 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 CDK5RAP1Q96SZ6 601 aaKnown RBP28.29■■■□□ 2.12
CCM2-201ENST00000258781 KIF9Q9HAQ2 790 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 DONSONQ9NYP3 566 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 AFF4Q9UHB7 1163 aaKnown RBP28.29■■■□□ 2.12
CCM2-201ENST00000258781 FAM159BA6NKW6 160 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 ARHGEF15O94989 841 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 JCHAINP01591 159 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 MYOGP15173 224 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 KPNA1P52294 538 aaPredicted RBP28.29■■■□□ 2.12
CCM2-201ENST00000258781 MS4A13Q5J8X5 152 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 CPLX4Q7Z7G2 160 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 SPATS2Q86XZ4 545 aaKnown RBP28.29■■■□□ 2.12
CCM2-201ENST00000258781 KLHDC8BQ8IXV7 354 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 DENND1AQ8TEH3 1009 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 ALKBH8Q96BT7 664 aaKnown RBP28.29■■■□□ 2.12
CCM2-201ENST00000258781 SLC39A8Q9C0K1 460 aa28.29■■■□□ 2.12
CCM2-201ENST00000258781 TBX18O95935 607 aa28.28■■■□□ 2.12
CCM2-201ENST00000258781 URODP06132 367 aa28.28■■■□□ 2.12
CCM2-201ENST00000258781 RHOQP17081 205 aa28.28■■■□□ 2.12
CCM2-201ENST00000258781 PGAM1P18669 254 aa28.28■■■□□ 2.12
CCM2-201ENST00000258781 NFKB1P19838 968 aa28.28■■■□□ 2.12
CCM2-201ENST00000258781 MGAT1P26572 445 aa28.28■■■□□ 2.12
CCM2-201ENST00000258781 GBP2P32456 591 aaPredicted RBP28.28■■■□□ 2.12
CCM2-201ENST00000258781 C4orf33Q8N1A6 199 aa28.28■■■□□ 2.12
CCM2-201ENST00000258781 OVCA2Q8WZ82 227 aa28.28■■■□□ 2.12
CCM2-201ENST00000258781 IGLV3-10A0A075B6K4 115 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 ARHGAP42A6NI28 874 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 PSMD3O43242 534 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 TYROBPO43914 113 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 MAFKO60675 156 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 SPAG7O75391 227 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 SESN2P58004 480 aaPredicted RBP28.27■■■□□ 2.12
CCM2-201ENST00000258781 PRPSAP1Q14558 356 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 SHHQ15465 462 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 TIGD7Q6NT04 549 aaPredicted RBP28.27■■■□□ 2.12
CCM2-201ENST00000258781 MIB1Q86YT6 1006 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 PPM1NQ8N819 430 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 PDZD8Q8NEN9 1154 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 IL12RB2Q99665 862 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 ZYG11BQ9C0D3 744 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 MOCS1Q9NZB8 636 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 GGA2Q9UJY4 613 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 SLC12A8A0AV02 714 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 LINC01553A4QN01 128 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 MATN3O15232 486 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 CACNG3O60359 315 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 ALDH1A2O94788 518 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 CCNB1P14635 433 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 TPGS2Q68CL5 300 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 CTAGE3PQ8IX95 158 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 UMODL1-AS1Q8N2C9 162 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 ARNTL2Q8WYA1 636 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 MLPHQ9BV36 600 aaPredicted RBP28.27■■■□□ 2.12
CCM2-201ENST00000258781 ZBP1Q9H171 429 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 CASS4Q9NQ75 786 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 MPP6Q9NZW5 540 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 VANGL2Q9ULK5 521 aa28.27■■■□□ 2.12
CCM2-201ENST00000258781 TLR5O60602 858 aa28.26■■■□□ 2.11
CCM2-201ENST00000258781 KRT4P19013 534 aa28.26■■■□□ 2.11
CCM2-201ENST00000258781 QPCTQ16769 361 aa28.26■■■□□ 2.11
CCM2-201ENST00000258781 TTC39BQ5VTQ0 682 aaPredicted RBP28.26■■■□□ 2.11
CCM2-201ENST00000258781 CASC4Q6P4E1 433 aa28.26■■■□□ 2.11
CCM2-201ENST00000258781 ARHGAP36Q6ZRI8 547 aa28.26■■■□□ 2.11
CCM2-201ENST00000258781 LRRC40Q9H9A6 602 aa28.26■■■□□ 2.11
CCM2-201ENST00000258781 NDFIP2Q9NV92 336 aa28.26■■■□□ 2.11
CCM2-201ENST00000258781 TMEM248Q9NWD8 314 aa28.26■■■□□ 2.11
CCM2-201ENST00000258781 HBS1LQ9Y450 684 aaKnown RBP28.26■■■□□ 2.11
CCM2-201ENST00000258781 CXorf49A8MYA2 514 aaPredicted RBP28.25■■■□□ 2.11
CCM2-201ENST00000258781 ABLIM3O94929 683 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 NDST2P52849 883 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 IL9RQ01113 521 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 SPARCL1Q14515 664 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 SNX30Q5VWJ9 437 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 TAX1BP1Q86VP1 789 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 LRRC34Q8IZ02 419 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 CNTD1Q8N815 330 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 MAGEB18Q96M61 343 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 NSRP1Q9H0G5 558 aaKnown RBP28.25■■■□□ 2.11
CCM2-201ENST00000258781 CCSER2Q9H7U1 834 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 MLXIPLQ9NP71 852 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 SMYD2Q9NRG4 433 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 MAGED2Q9UNF1 606 aaPredicted RBP28.25■■■□□ 2.11
CCM2-201ENST00000258781 FAM155BO75949 473 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 ZWINTO95229 277 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 MT-ND3P03897 115 aa28.25■■■□□ 2.11
CCM2-201ENST00000258781 CA4P22748 312 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms