RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 RAB21Q9UL25 225 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 LHX6Q9UPM6 363 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 OBSL1O75147 1896 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 MYO9BQ13459 2157 aa13.26□□□□□ -0.29
LSM8-201ENST00000249299 ZSCAN5CA6NGD5 496 aaPredicted RBP13.25□□□□□ -0.29
LSM8-201ENST00000249299 RASA4BC9J798 803 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 SGK1O00141 431 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 MATN3O15232 486 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 TTI1O43156 1089 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 RASA4O43374 803 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 ECI2O75521 394 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 HEXIM1O94992 359 aaKnown RBP13.25□□□□□ -0.29
LSM8-201ENST00000249299 LUC7L3O95232 432 aaKnown RBP13.25□□□□□ -0.29
LSM8-201ENST00000249299 KCNJ1P48048 391 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 PLK1P53350 603 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 RPS24P62847 133 aaKnown RBP13.25□□□□□ -0.29
LSM8-201ENST00000249299 GNA12Q03113 381 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 CAV1Q03135 178 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 TNK2Q07912 1038 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 HNRNPDQ14103 355 aaKnown RBP13.25□□□□□ -0.29
LSM8-201ENST00000249299 RFTN1Q14699 578 aaPredicted RBP13.25□□□□□ -0.29
LSM8-201ENST00000249299 ERCC6LQ2NKX8 1250 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 MFSD6LQ8IWD5 586 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 CCDC13Q8IYE1 715 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 ATPAF2Q8N5M1 289 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 ATP2A3Q93084 1043 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 LRRC45Q96CN5 670 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 CDX2Q99626 313 aaPredicted RBP13.25□□□□□ -0.29
LSM8-201ENST00000249299 TMEM121Q9BTD3 319 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 SLC39A8Q9C0K1 460 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 CDH23Q9H251 3354 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 NOL6Q9H6R4 1146 aaKnown RBP13.25□□□□□ -0.29
LSM8-201ENST00000249299 GDF3Q9NR23 364 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 SPHK2Q9NRA0 654 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 WHRNQ9P202 907 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 PAK5Q9P286 719 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 MFHAS1Q9Y4C4 1052 aa13.25□□□□□ -0.29
LSM8-201ENST00000249299 HEPACAM2A8MVW5 462 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 KCNN4O15554 427 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 HOXC11O43248 304 aaPredicted RBP13.24□□□□□ -0.29
LSM8-201ENST00000249299 MAFKO60675 156 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 TBL1XO60907 577 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 NFATC1O95644 943 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 ADH1CP00326 375 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 KRT14P02533 472 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 ITIH2P19823 946 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 FCARP24071 287 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 HOXD9P28356 352 aaPredicted RBP13.24□□□□□ -0.29
LSM8-201ENST00000249299 RBL1P28749 1068 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 RENBPP51606 427 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 IFI35P80217 286 aaPredicted RBP13.24□□□□□ -0.29
LSM8-201ENST00000249299 IL10RBQ08334 325 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 SERINC3Q13530 473 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 CDH18Q13634 790 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 DMC1Q14565 340 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 PUS10Q3MIT2 529 aaKnown RBP13.24□□□□□ -0.29
LSM8-201ENST00000249299 FYB2Q5VWT5 728 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 TFAP2DQ7Z6R9 452 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 PCGF5Q86SE9 256 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 METTL3Q86U44 580 aaKnown RBP13.24□□□□□ -0.29
LSM8-201ENST00000249299 CCNYQ8ND76 341 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 DDI1Q8WTU0 396 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 NSMCE1Q8WV22 266 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 MAML1Q92585 1016 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 ARHGEF2Q92974 986 aaKnown RBP13.24□□□□□ -0.29
LSM8-201ENST00000249299 MYEOVQ96EZ4 313 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 P2RY11Q96G91 374 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 LGMNQ99538 433 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 FAM83CQ9BQN1 747 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 ACE2Q9BYF1 805 aaPredicted RBP13.24□□□□□ -0.29
LSM8-201ENST00000249299 TSPYL1Q9H0U9 437 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 SMG9Q9H0W8 520 aaKnown RBP13.24□□□□□ -0.29
LSM8-201ENST00000249299 POMKQ9H5K3 350 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 UBE2ZQ9H832 354 aaPredicted RBP13.24□□□□□ -0.29
LSM8-201ENST00000249299 ANKZF1Q9H8Y5 726 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 NDFIP2Q9NV92 336 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 DUS2Q9NX74 493 aaKnown RBP13.24□□□□□ -0.29
LSM8-201ENST00000249299 KIAA1522Q9P206 1035 aaPredicted RBP13.24□□□□□ -0.29
LSM8-201ENST00000249299 DMGDHQ9UI17 866 aaKnown RBP13.24□□□□□ -0.29
LSM8-201ENST00000249299 IPO11Q9UI26 975 aaKnown RBP13.24□□□□□ -0.29
LSM8-201ENST00000249299 HPCAL4Q9UM19 191 aa13.24□□□□□ -0.29
LSM8-201ENST00000249299 USP15Q9Y4E8 981 aaPredicted RBP13.24□□□□□ -0.29
LSM8-201ENST00000249299 A0A0A0MRY4 1105 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 ANHXE9PGG2 379 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 H0Y626 953 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 KDELR3O43731 214 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 RHOCP08134 193 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 RHOXF2BP0C7M4 288 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 IFNAR2P48551 515 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 PAPOLAP51003 745 aaKnown RBP13.23□□□□□ -0.29
LSM8-201ENST00000249299 IRAK1P51617 712 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 GEMIN4P57678 1058 aaKnown RBP13.23□□□□□ -0.29
LSM8-201ENST00000249299 CDK16Q00536 496 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 GAD2Q05329 585 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 SLC20A2Q08357 652 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 AP1B1Q10567 949 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 NR1H3Q13133 447 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 EML3Q32P44 896 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 TEX44Q53QW1 395 aa13.23□□□□□ -0.29
LSM8-201ENST00000249299 HABP4Q5JVS0 413 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms