RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 IL12RB2Q99665 862 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 SEPT5Q99719 369 aaPredicted RBP18.9■□□□□ 0.62
HOXC11-201ENST00000243082 TTPALQ9BTX7 342 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 VANGL2Q9ULK5 521 aa18.9■□□□□ 0.62
HOXC11-201ENST00000243082 WDR91A4D1P6 747 aa18.89■□□□□ 0.61
HOXC11-201ENST00000243082 COPEO14579 308 aa18.89■□□□□ 0.61
HOXC11-201ENST00000243082 MATN3O15232 486 aa18.89■□□□□ 0.61
HOXC11-201ENST00000243082 PRSS55Q6UWB4 352 aaPredicted RBP18.89■□□□□ 0.61
HOXC11-201ENST00000243082 TIFABQ6ZNK6 161 aa18.89■□□□□ 0.61
HOXC11-201ENST00000243082 ANKS3Q6ZW76 656 aa18.89■□□□□ 0.61
HOXC11-201ENST00000243082 DNAAF3Q8N9W5 541 aa18.89■□□□□ 0.61
HOXC11-201ENST00000243082 FAM111AQ96PZ2 611 aa18.89■□□□□ 0.61
HOXC11-201ENST00000243082 SRPK1Q96SB4 655 aaKnown RBP18.89■□□□□ 0.61
HOXC11-201ENST00000243082 PPP1R12CQ9BZL4 782 aa18.89■□□□□ 0.61
HOXC11-201ENST00000243082 RNF208Q9H0X6 261 aa18.89■□□□□ 0.61
HOXC11-201ENST00000243082 LRRC40Q9H9A6 602 aa18.89■□□□□ 0.61
HOXC11-201ENST00000243082 ABCF3Q9NUQ8 709 aa18.89■□□□□ 0.61
HOXC11-201ENST00000243082 UBP1Q9NZI7 540 aa18.89■□□□□ 0.61
HOXC11-201ENST00000243082 BFARQ9NZS9 450 aa18.89■□□□□ 0.61
HOXC11-201ENST00000243082 RPS6KL1Q9Y6S9 549 aa18.89■□□□□ 0.61
HOXC11-201ENST00000243082 FNDC1Q4ZHG4 1894 aaPredicted RBP18.89■□□□□ 0.61
HOXC11-201ENST00000243082 CCL5P13501 91 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 ACTN3Q08043 901 aaPredicted RBP18.88■□□□□ 0.61
HOXC11-201ENST00000243082 DUSP4Q13115 394 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 SPANXN3Q5MJ09 141 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 CERCAMQ5T4B2 595 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 SLC39A5Q6ZMH5 540 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 TMEM135Q86UB9 458 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 CDKL2Q92772 493 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 TLR8Q9NR97 1041 aaKnown RBP18.88■□□□□ 0.61
HOXC11-201ENST00000243082 MKS1Q9NXB0 559 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 EFEMP2O95967 443 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 CNTFP26441 200 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 PSEN1P49768 467 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 MGAT5Q09328 741 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 PRPSAP1Q14558 356 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 TRIP4Q15650 581 aaPredicted RBP18.88■□□□□ 0.61
HOXC11-201ENST00000243082 MS4A13Q5J8X5 152 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 PACS1Q6VY07 963 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 DEFB128Q7Z7B8 93 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 CHSY1Q86X52 802 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 LRRC43Q8N309 656 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 CCDC63Q8NA47 563 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 PTPRN2Q92932 1015 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 APOL2Q9BQE5 337 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 NOL6Q9H6R4 1146 aaKnown RBP18.88■□□□□ 0.61
HOXC11-201ENST00000243082 ACTR5Q9H9F9 607 aaPredicted RBP18.88■□□□□ 0.61
HOXC11-201ENST00000243082 PRDM5Q9NQX1 630 aaPredicted RBP18.88■□□□□ 0.61
HOXC11-201ENST00000243082 IL1RAPL1Q9NZN1 696 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 PLLPQ9Y342 182 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 PSAT1Q9Y617 370 aa18.88■□□□□ 0.61
HOXC11-201ENST00000243082 NPY2RP49146 381 aa18.87■□□□□ 0.61
HOXC11-201ENST00000243082 PAPOLAP51003 745 aaKnown RBP18.87■□□□□ 0.61
HOXC11-201ENST00000243082 NAB1Q13506 487 aa18.87■□□□□ 0.61
HOXC11-201ENST00000243082 PSMD5Q16401 504 aa18.87■□□□□ 0.61
HOXC11-201ENST00000243082 ZNF449Q6P9G9 518 aa18.87■□□□□ 0.61
HOXC11-201ENST00000243082 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.87■□□□□ 0.61
HOXC11-201ENST00000243082 C2orf15Q8WU43 125 aaKnown RBP18.87■□□□□ 0.61
HOXC11-201ENST00000243082 CERS2Q96G23 380 aa18.87■□□□□ 0.61
HOXC11-201ENST00000243082 OXCT2Q9BYC2 517 aaPredicted RBP18.87■□□□□ 0.61
HOXC11-201ENST00000243082 ALG13Q9NP73 1137 aaKnown RBP18.87■□□□□ 0.61
HOXC11-201ENST00000243082 OLA1Q9NTK5 396 aaKnown RBP18.87■□□□□ 0.61
HOXC11-201ENST00000243082 COMMD8Q9NX08 183 aa18.87■□□□□ 0.61
HOXC11-201ENST00000243082 CDY1Q9Y6F8 540 aa18.87■□□□□ 0.61
HOXC11-201ENST00000243082 TANC1Q9C0D5 1861 aa18.87■□□□□ 0.61
HOXC11-201ENST00000243082 GREB1Q4ZG55 1949 aa18.87■□□□□ 0.61
HOXC11-201ENST00000243082 ZCWPW2A0A1B0GU75 182 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 ADAM12O43184 909 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 ERVK-10P10266 1014 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 SCTRP47872 440 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 MNX1P50219 401 aaPredicted RBP18.86■□□□□ 0.61
HOXC11-201ENST00000243082 RNF43Q68DV7 783 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 OTOAQ7RTW8 1153 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 MIB1Q86YT6 1006 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 MICALL1Q8N3F8 863 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 SPATA22Q8NHS9 363 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 PPM1EQ8WY54 764 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 RMDN2Q96LZ7 410 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 FCRL5Q96RD9 977 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 PLCD4Q9BRC7 762 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 SLC13A1Q9BZW2 595 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 MANSC1Q9H8J5 431 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 GLOD4Q9HC38 313 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 MARCH2Q9P0N8 246 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 FNIP2Q9P278 1114 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 GGT7Q9UJ14 662 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 NYNRINQ9P2P1 1898 aaKnown RBP18.86■□□□□ 0.61
HOXC11-201ENST00000243082 PSMD3O43242 534 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 USP1O94782 785 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 PARNO95453 639 aaKnown RBP18.86■□□□□ 0.61
HOXC11-201ENST00000243082 IGLV3-27P01718 113 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 ZDHHC11BP0C7U3 371 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 FRG1Q14331 258 aaKnown RBP18.86■□□□□ 0.61
HOXC11-201ENST00000243082 ANKRD20A4Q4UJ75 823 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 C10orf120Q5SQS8 335 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 NAPEPLDQ6IQ20 393 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 LRRC49Q8IUZ0 686 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 UMODL1-AS1Q8N2C9 162 aa18.86■□□□□ 0.61
HOXC11-201ENST00000243082 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.86■□□□□ 0.61
HOXC11-201ENST00000243082 ATP6V0D2Q8N8Y2 350 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms